ERR1633088.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633088.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	471338
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1698	0.3602510300463786	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1214	0.2575646351450551	No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC	1108	0.23507546601377358	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	720	0.15275662051436548	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	679	0.14405797962396413	No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG	667	0.1415120359487247	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	600	0.12729718376197124	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA	552	0.11711340906101354	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	543	0.11520395130458397	No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG	506	0.10735395830592909	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC	488	0.10353504279306994	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCTTCG	50	7.3123374E-9	33.300003	21
TTGTCGC	40	1.5974165E-6	32.375	37
TAGACTG	25	0.005493094	29.6	5
GTCTATC	25	0.005493094	29.6	1
CGCTCTC	65	2.9813236E-9	28.461538	29
GCCGCTC	60	4.3113687E-8	27.750002	27
GCTTCGC	60	4.3113687E-8	27.750002	22
CCGCTCT	70	6.5720087E-9	26.42857	28
TTTGTCG	50	9.076235E-6	25.900002	36
GGTATCA	395	0.0	25.759493	1
CGAGTCG	55	1.8995728E-5	23.545454	21
TCGGTAG	55	1.8995728E-5	23.545454	28
GGTACCT	40	0.0019295061	23.125002	18
GTATCAA	1090	0.0	22.573395	1
TAGAACC	50	2.6988256E-4	22.2	25
GGACCGT	50	2.6988256E-4	22.2	6
AGTCGCC	60	3.7202844E-5	21.583334	23
GTCGCCG	70	5.0913914E-6	21.142857	24
GGCTCGG	70	5.0913914E-6	21.142857	25
TTCGCCG	80	6.9422094E-7	20.8125	24