##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1633088.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 471338 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.736944612995345 33.0 33.0 33.0 27.0 33.0 2 31.272399000292783 33.0 33.0 33.0 27.0 33.0 3 31.70596260008741 33.0 33.0 33.0 27.0 33.0 4 31.84306803185824 33.0 33.0 33.0 27.0 33.0 5 31.946157534508146 33.0 33.0 33.0 33.0 33.0 6 34.834488201672684 37.0 37.0 37.0 27.0 37.0 7 35.034228091093865 37.0 37.0 37.0 33.0 37.0 8 35.193396246430375 37.0 37.0 37.0 33.0 37.0 9 35.2785771569447 37.0 37.0 37.0 33.0 37.0 10 35.29838672035779 37.0 37.0 37.0 33.0 37.0 11 35.348077176039276 37.0 37.0 37.0 33.0 37.0 12 35.292893846878464 37.0 37.0 37.0 33.0 37.0 13 35.32766507262304 37.0 37.0 37.0 33.0 37.0 14 35.30317097284751 37.0 37.0 37.0 33.0 37.0 15 35.32515095324374 37.0 37.0 37.0 33.0 37.0 16 35.32538008817452 37.0 37.0 37.0 33.0 37.0 17 35.28759191917477 37.0 37.0 37.0 33.0 37.0 18 35.298238206976734 37.0 37.0 37.0 33.0 37.0 19 35.29850340944291 37.0 37.0 37.0 33.0 37.0 20 35.29237617166449 37.0 37.0 37.0 33.0 37.0 21 35.30435059341704 37.0 37.0 37.0 33.0 37.0 22 35.29939448972924 37.0 37.0 37.0 33.0 37.0 23 35.275261065307696 37.0 37.0 37.0 33.0 37.0 24 35.29608900619089 37.0 37.0 37.0 33.0 37.0 25 35.29346880582512 37.0 37.0 37.0 33.0 37.0 26 35.260142403116234 37.0 37.0 37.0 33.0 37.0 27 35.19486016404364 37.0 37.0 37.0 33.0 37.0 28 35.16418366437673 37.0 37.0 37.0 33.0 37.0 29 35.19199597740899 37.0 37.0 37.0 33.0 37.0 30 35.15219226966635 37.0 37.0 37.0 33.0 37.0 31 35.15042708205152 37.0 37.0 37.0 33.0 37.0 32 35.18131998693082 37.0 37.0 37.0 33.0 37.0 33 35.182289567147144 37.0 37.0 37.0 33.0 37.0 34 35.110661563464014 37.0 37.0 37.0 33.0 37.0 35 35.097798183044866 37.0 37.0 37.0 33.0 37.0 36 35.09179612083049 37.0 37.0 37.0 33.0 37.0 37 35.11454624918848 37.0 37.0 37.0 33.0 37.0 38 34.96061637296378 37.0 37.0 37.0 27.0 37.0 39 35.04639558024178 37.0 37.0 37.0 27.0 37.0 40 35.0638734835723 37.0 37.0 37.0 27.0 37.0 41 35.08859883989833 37.0 37.0 37.0 33.0 37.0 42 35.00131540423221 37.0 37.0 37.0 27.0 37.0 43 34.80081173170846 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 17.0 16 26.0 17 29.0 18 15.0 19 25.0 20 27.0 21 95.0 22 212.0 23 527.0 24 1170.0 25 2137.0 26 3508.0 27 5417.0 28 7923.0 29 10727.0 30 13975.0 31 18187.0 32 23214.0 33 30388.0 34 43674.0 35 80083.0 36 229960.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.29456992646466 20.010905125408943 13.432398830563205 25.262126117563195 2 16.318013824474157 22.400909750539952 38.264896952929746 23.016179472056148 3 17.84176111410495 26.913807076874768 29.982517853430025 25.261913955590252 4 12.726535946603073 17.75413821928213 39.228748795980806 30.290577038133993 5 14.020087495597638 37.03266021411386 35.062099809478546 13.885152480809952 6 29.790086943976508 39.55950931178899 17.258103526556315 13.392300217678185 7 26.923354365656916 31.91531342688262 23.379825093669513 17.781507113790955 8 24.455061972512297 35.84561397553348 20.460688508034576 19.23863554391965 9 26.27986710174015 15.023825789560782 20.04930644251047 38.647000666188596 10 15.664767109802307 27.547110566090577 33.49931471682741 23.2888076072797 11 34.32653424930729 23.586046531363905 23.733923426500727 18.353495792828074 12 23.732862616636044 25.48616916098426 29.456568322520145 21.324399899859547 13 27.7616063207295 21.96937229758687 25.975414670576104 24.293606711107525 14 22.19850722835842 20.676881558456987 27.463730910726486 29.66088030245811 15 24.48243086702112 27.907998082055762 24.547988916658532 23.061582134264583 16 23.141142874115815 27.77709414475387 24.936457489105482 24.145305492024832 17 22.725093245187107 27.075050176306597 25.85702828967747 24.342828288828823 18 23.14390097976399 26.753624787307622 27.456093079700768 22.646381153227622 19 25.277613941587568 25.550029914838184 26.72413427306943 22.448221870504817 20 24.536107846174083 25.914524184343296 27.127666345594882 22.421701623887742 21 23.98851779402467 26.5692560328257 26.694643758831244 22.747582414318387 22 23.29644543830542 26.568195222961016 26.74301668866079 23.392342650072774 23 23.339938642757428 26.58007629344547 27.145487951321556 22.934497112475547 24 23.82048551145887 26.89874357679627 25.676266288735473 23.60450462300939 25 23.652453228893066 26.537219574912267 27.174341979640936 22.635985216553724 26 23.82090983540474 26.73240859001396 26.988700253321397 22.457981321259904 27 23.850400349642932 26.589835744200553 26.051580818860348 23.508183087296167 28 22.85917961208305 26.394010243180055 27.484522784074272 23.262287360662622 29 24.56581052238521 26.19712393229487 26.46253856043858 22.774526984881337 30 24.079959604360354 26.013603825704696 27.032193457773403 22.874243112161547 31 23.5837127496616 26.09634699514998 26.977879992701624 23.342060262486793 32 22.48832048338984 26.068553776695282 27.337494536829198 24.105631203085682 33 22.81377694987461 26.421379137688877 27.480067382642602 23.284776529793906 34 23.440291255956446 26.354335954240902 27.300578353538224 22.90479443626442 35 23.730953158879615 26.65836406145908 26.699735646181722 22.910947133479585 36 24.182858161234613 26.559708744043554 26.155328023626357 23.102105071095476 37 23.251042776096984 26.12074562203769 26.749381547848888 23.87883005401644 38 23.783569328167896 26.359215679618448 26.62760057538327 23.229614416830387 39 22.956774119633895 26.417772384148954 27.043225880366105 23.582227615851046 40 23.300476515791217 26.70970725890974 27.3786539595789 22.611162265720143 41 23.123109106416205 25.61092040107099 27.46330658678061 23.802663905732192 42 22.602887948775614 27.01034077456093 27.004824563264577 23.381946713398875 43 23.599200573685973 25.335109836253388 27.21401626858008 23.85167332148055 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 14.5 2 22.0 3 99.5 4 177.0 5 177.0 6 217.0 7 257.0 8 262.5 9 268.0 10 330.5 11 393.0 12 393.0 13 643.5 14 894.0 15 1561.5 16 2229.0 17 2504.5 18 2780.0 19 2780.0 20 2519.0 21 2258.0 22 2521.0 23 2784.0 24 3721.5 25 4659.0 26 4659.0 27 6215.5 28 7772.0 29 9668.5 30 11565.0 31 14378.0 32 17191.0 33 17191.0 34 20544.0 35 23897.0 36 26547.0 37 29197.0 38 31588.0 39 33979.0 40 33979.0 41 35694.0 42 37409.0 43 38304.0 44 39199.0 45 38166.0 46 37133.0 47 37133.0 48 35893.5 49 34654.0 50 34687.0 51 34720.0 52 33139.0 53 31558.0 54 31558.0 55 31092.5 56 30627.0 57 26668.5 58 22710.0 59 20325.0 60 17940.0 61 17940.0 62 16420.0 63 14900.0 64 11937.5 65 8975.0 66 7532.5 67 6090.0 68 6090.0 69 5113.0 70 4136.0 71 3588.5 72 3041.0 73 3176.5 74 3312.0 75 3312.0 76 3095.0 77 2878.0 78 1968.5 79 1059.0 80 668.5 81 278.0 82 278.0 83 229.0 84 180.0 85 155.5 86 131.0 87 91.5 88 52.0 89 52.0 90 37.5 91 23.0 92 13.0 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 471338.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.01493831025706 #Duplication Level Percentage of deduplicated Percentage of total 1 88.3379644239097 50.36583592082895 2 6.294445526784617 7.177548468137969 3 1.6842371113433892 2.8808002500926673 4 0.8220876482322023 1.8748510619833327 5 0.470446332161244 1.3411234303230013 6 0.34861065773937616 1.1925609087185203 7 0.2360092607085063 0.9419237407961405 8 0.1768634915858788 0.806708884968444 9 0.15096920337928035 0.774674983567649 >10 1.20826145267796 13.830217422367674 >50 0.165147698277867 6.59412286860104 >100 0.10119528663366936 10.442195935237237 >500 0.002633334596415188 0.9152069437333324 >1k 0.0011285719698922235 0.8622291806440116 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1698 0.3602510300463786 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1214 0.2575646351450551 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 1108 0.23507546601377358 No Hit GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC 720 0.15275662051436548 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 679 0.14405797962396413 No Hit TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG 667 0.1415120359487247 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 600 0.12729718376197124 No Hit GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA 552 0.11711340906101354 No Hit TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG 543 0.11520395130458397 No Hit CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG 506 0.10735395830592909 No Hit AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC 488 0.10353504279306994 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 2.1216197293661874E-4 0.0 0.0 2 2.1216197293661874E-4 0.0 2.1216197293661874E-4 0.0 0.0 3 2.1216197293661874E-4 0.0 4.243239458732375E-4 0.0 0.0 4 2.1216197293661874E-4 0.0 8.48647891746475E-4 0.0 0.0 5 2.1216197293661874E-4 0.0 8.48647891746475E-4 0.0 0.0 6 2.1216197293661874E-4 0.0 0.002121619729366187 0.0 0.0 7 2.1216197293661874E-4 0.0 0.006152697215161943 0.0 0.0 8 2.1216197293661874E-4 0.0 0.007213507079845037 0.0 0.0 9 2.1216197293661874E-4 0.0 0.008698640890401368 4.243239458732375E-4 0.0 10 6.364859188098562E-4 0.0 0.010395936673894319 4.243239458732375E-4 0.0 11 6.364859188098562E-4 0.0 0.015275662051436548 4.243239458732375E-4 0.0 12 6.364859188098562E-4 0.0 0.01676079586199288 4.243239458732375E-4 0.0 13 6.364859188098562E-4 0.0 0.017821605726675974 4.243239458732375E-4 0.0 14 6.364859188098562E-4 0.0 0.018882415591359065 6.364859188098562E-4 0.0 15 8.48647891746475E-4 0.0 0.02142835926659849 8.48647891746475E-4 0.0 16 8.48647891746475E-4 0.0 0.023974302941837916 8.48647891746475E-4 0.0 17 8.48647891746475E-4 0.0 0.02545943675239425 8.48647891746475E-4 0.0 18 8.48647891746475E-4 0.0 0.026308084644140722 8.48647891746475E-4 0.0 19 8.48647891746475E-4 0.0 0.027581056481760437 8.48647891746475E-4 0.0 20 8.48647891746475E-4 0.0 0.02821754240057029 0.0010608098646830936 0.0 21 8.48647891746475E-4 0.0 0.02864186634644353 0.001485133810556331 0.0 22 8.48647891746475E-4 0.0 0.029066190292316767 0.00169729578349295 0.0 23 8.48647891746475E-4 0.0 0.029278352265253386 0.00169729578349295 0.0 24 8.48647891746475E-4 0.0 0.029490514238190005 0.00169729578349295 0.0 25 8.48647891746475E-4 0.0 0.029490514238190005 0.00169729578349295 0.0 26 8.48647891746475E-4 0.0 0.029490514238190005 0.002121619729366187 0.0 27 8.48647891746475E-4 0.0 0.029490514238190005 0.0027581056481760435 0.0 28 8.48647891746475E-4 0.0 0.029490514238190005 0.010820260619767555 0.0 29 8.48647891746475E-4 0.0 0.029490514238190005 0.027581056481760437 0.0 30 8.48647891746475E-4 0.0 0.029490514238190005 0.0543134650717744 0.0 31 8.48647891746475E-4 0.0 0.029490514238190005 0.13196474716657686 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCTTCG 50 7.3123374E-9 33.300003 21 TTGTCGC 40 1.5974165E-6 32.375 37 TAGACTG 25 0.005493094 29.6 5 GTCTATC 25 0.005493094 29.6 1 CGCTCTC 65 2.9813236E-9 28.461538 29 GCCGCTC 60 4.3113687E-8 27.750002 27 GCTTCGC 60 4.3113687E-8 27.750002 22 CCGCTCT 70 6.5720087E-9 26.42857 28 TTTGTCG 50 9.076235E-6 25.900002 36 GGTATCA 395 0.0 25.759493 1 CGAGTCG 55 1.8995728E-5 23.545454 21 TCGGTAG 55 1.8995728E-5 23.545454 28 GGTACCT 40 0.0019295061 23.125002 18 GTATCAA 1090 0.0 22.573395 1 TAGAACC 50 2.6988256E-4 22.2 25 GGACCGT 50 2.6988256E-4 22.2 6 AGTCGCC 60 3.7202844E-5 21.583334 23 GTCGCCG 70 5.0913914E-6 21.142857 24 GGCTCGG 70 5.0913914E-6 21.142857 25 TTCGCCG 80 6.9422094E-7 20.8125 24 >>END_MODULE