ERR1633030.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1633030.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	325923
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	909	0.27890023103616496	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	628	0.19268354795457823	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	457	0.140217167858666	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	455	0.13960352598619918	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA	389	0.11935334419479447	No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG	360	0.11045553704402573	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG	358	0.10984189517155893	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC	355	0.1089214323628587	No Hit
TTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGG	346	0.10616004393675807	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	346	0.10616004393675807	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	336	0.10309183457442402	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGGCA	25	0.0054906374	29.6	15
CGCAATA	25	0.0054906374	29.6	34
AGTACCG	75	4.6020432E-10	27.133331	5
TAACGGC	100	0.0	25.900002	36
AACGGCC	100	0.0	25.900002	37
GGTATCA	215	0.0	24.953487	1
TACCGCA	90	1.4188117E-10	24.666668	7
TTAACGG	105	1.8189894E-12	24.666666	35
CGCAAGG	85	1.9626896E-9	23.941175	10
TAGTACC	85	1.9626896E-9	23.941175	4
CCGCAAG	90	3.803507E-9	22.611113	9
GTATCAA	590	0.0	21.008474	1
GTACTAT	80	6.928676E-7	20.8125	1
GATATAT	45	0.003820016	20.555557	1
GTATACG	45	0.003820016	20.555557	1
TATACAG	45	0.003820016	20.555557	5
CAAGGGA	100	1.2812961E-8	20.35	12
GTATTAG	175	0.0	20.085714	1
TCAACCC	120	2.3646862E-10	20.041666	16
GACACAT	140	3.6379788E-12	19.821428	26