ERR1632970.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632970.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	363288
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1774	0.48831780846050515	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1297	0.3570170223073705	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	603	0.16598401268415142	No Hit
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA	531	0.146165026094999	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	519	0.14286186166347362	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	464	0.12772235801898218	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	447	0.1230428750743212	No Hit
ATTCAAGATCATCTTCACAACATCACCTGCTAGCCACGTGGGA	394	0.10845389883508401	No Hit
ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT	382	0.10515073440355861	No Hit
GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC	377	0.10377441589042302	No Hit
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA	371	0.10212283367466031	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCGTA	35	8.8576716E-4	26.428572	37
GTCGTTG	35	8.8576716E-4	26.428572	21
TAATACT	75	1.3671524E-8	24.666666	4
GTATCAA	850	0.0	23.288233	1
GGTATCA	300	0.0	22.816668	1
TCGCCGT	50	2.6971742E-4	22.2	25
CGTCCGC	50	2.6971742E-4	22.2	29
ACGTGGG	85	5.1561074E-8	21.764706	36
GCCGGCA	60	3.717262E-5	21.583332	15
CGTGGGA	90	9.433643E-8	20.555557	37
TCGTTGG	45	0.003820847	20.555557	22
TCACCGT	45	0.003820847	20.555557	22
GGAGTCG	45	0.003820847	20.555557	18
CCAACGA	45	0.003820847	20.555557	32
GTCGCCG	55	5.133793E-4	20.181818	24
CGAGTCG	55	5.133793E-4	20.181818	21
GAGTCGC	55	5.133793E-4	20.181818	22
GTCCTAT	55	5.133793E-4	20.181818	1
GTGTAGA	55	5.133793E-4	20.181818	1
GTCCGCC	55	5.133793E-4	20.181818	30