Basic Statistics
Measure | Value |
---|---|
Filename | ERR1632969.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 388148 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 1336 | 0.344198604655956 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 937 | 0.2414027638941847 | No Hit |
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC | 689 | 0.17750960973649227 | No Hit |
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC | 631 | 0.16256685594154807 | No Hit |
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT | 627 | 0.16153632119706915 | No Hit |
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA | 618 | 0.1592176180219916 | No Hit |
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG | 581 | 0.1496851716355617 | No Hit |
ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT | 547 | 0.14092562630749095 | No Hit |
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA | 500 | 0.12881684305986377 | No Hit |
CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC | 479 | 0.12340653565134949 | No Hit |
GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC | 475 | 0.12237600090687058 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 457 | 0.11773859455671547 | No Hit |
GTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTAT | 451 | 0.11619279243999711 | No Hit |
CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG | 438 | 0.11284355452044065 | No Hit |
ATTCAAGATCATCTTCACAACATCACCTGCTAGCCACGTGGGA | 436 | 0.1123282871482012 | No Hit |
ACTTTATTCCATTTGTAATTTTTGGCTACACAACACTAAAAGA | 425 | 0.1094943166008842 | No Hit |
CTTTATAAACTGGTTGATTCAGACCAAAATCACTGACAGGAAA | 405 | 0.10434164287848964 | No Hit |
CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGC | 398 | 0.10253820707565155 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGACAA | 25 | 0.005491915 | 29.599998 | 16 |
AGGCGAC | 25 | 0.005491915 | 29.599998 | 14 |
GTACGAT | 25 | 0.005491915 | 29.599998 | 20 |
TTCGCCG | 55 | 6.24379E-7 | 26.909094 | 24 |
GTGCCAA | 35 | 8.8587706E-4 | 26.42857 | 20 |
GCCGGCA | 50 | 9.070847E-6 | 25.899998 | 15 |
GTATAGA | 50 | 9.070847E-6 | 25.899998 | 1 |
GGTATCA | 230 | 0.0 | 25.73913 | 1 |
GTATCAA | 730 | 0.0 | 24.328768 | 1 |
CCGGCAG | 55 | 1.8984512E-5 | 23.545456 | 16 |
ACGGGTA | 55 | 1.8984512E-5 | 23.545456 | 16 |
CCGTTAA | 40 | 0.0019288954 | 23.125002 | 16 |
GCCGCTC | 60 | 3.7181053E-5 | 21.583334 | 27 |
TCGCCGC | 70 | 5.087568E-6 | 21.142857 | 25 |
GTCGCCA | 90 | 9.4378265E-8 | 20.555555 | 12 |
TATAGGT | 45 | 0.0038213118 | 20.555555 | 5 |
CGGAGTT | 55 | 5.134661E-4 | 20.18182 | 24 |
CCGCTCT | 65 | 6.887085E-5 | 19.923077 | 28 |
CGCTCTC | 65 | 6.887085E-5 | 19.923077 | 29 |
GCTTCGC | 75 | 9.239866E-6 | 19.733332 | 22 |