ERR1632928.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632928.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	332341
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1188	0.3574641708365805	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	900	0.2708061900277125	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	456	0.137208469614041	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	359	0.10802158024438754	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	341	0.10260545644383329	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGTCG	35	5.6152567E-7	37.0	21
AACGGCC	35	2.383239E-5	31.714285	37
GGTATCA	235	0.0	28.340427	1
TTAACGG	40	5.92762E-5	27.750002	35
TCGCCGT	50	9.0657195E-6	25.899998	25
TCCGCCG	50	9.0657195E-6	25.899998	31
CGCCGTC	45	1.3204488E-4	24.666666	26
GAGTTCC	55	1.8973866E-5	23.545454	15
GTATCAA	650	0.0	23.33846	1
CGTGCAA	40	0.0019283143	23.125002	11
CTAACCG	40	0.0019283143	23.125002	6
TAACCGT	40	0.0019283143	23.125002	7
GGGTAAG	50	2.6965048E-4	22.199999	1
TAACGGC	50	2.6965048E-4	22.199999	36
CCGTCCG	50	2.6965048E-4	22.199999	28
TGCCGAG	50	2.6965048E-4	22.199999	11
GAGTCGC	60	3.716034E-5	21.583334	22
TCGAGCT	60	3.716034E-5	21.583334	27
AGTCGCC	60	3.716034E-5	21.583334	23
CACTAAC	80	6.929513E-7	20.8125	32