Basic Statistics
Measure | Value |
---|---|
Filename | ERR1632918.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 442653 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 1526 | 0.3447395589773479 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1091 | 0.24646845271578416 | No Hit |
GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA | 980 | 0.22139237732490236 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 554 | 0.12515446636530192 | No Hit |
GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA | 530 | 0.1197326122267329 | No Hit |
ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC | 485 | 0.10956663571691597 | No Hit |
CTGTTACTACAGCCACTGCTGGGTGCCCAGGGAGCCCCACTGG | 470 | 0.1061779768803103 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 310 | 0.0 | 27.451614 | 1 |
TAGTACC | 55 | 1.8992341E-5 | 23.545454 | 4 |
GTATCAA | 840 | 0.0 | 22.684525 | 1 |
CCGCTCT | 50 | 2.6984676E-4 | 22.199999 | 28 |
AGTACCG | 85 | 5.1626557E-8 | 21.764706 | 5 |
GTTCTAG | 45 | 0.003822148 | 20.555555 | 1 |
CCCTTAG | 45 | 0.003822148 | 20.555555 | 1 |
CGCAATA | 45 | 0.003822148 | 20.555555 | 28 |
AGCTTCG | 55 | 5.13623E-4 | 20.181818 | 21 |
GCTTCGC | 55 | 5.13623E-4 | 20.181818 | 22 |
ATAGTAC | 140 | 3.6379788E-12 | 19.821428 | 3 |
GCTTTAT | 245 | 0.0 | 18.87755 | 1 |
CTTTATT | 305 | 0.0 | 18.803278 | 2 |
CATCTAT | 60 | 9.224592E-4 | 18.5 | 1 |
CGGGGTT | 70 | 1.2170496E-4 | 18.5 | 16 |
CGCTCTC | 60 | 9.224592E-4 | 18.5 | 29 |
TCGCCGG | 50 | 0.0070282193 | 18.499998 | 13 |
GTATTAG | 200 | 0.0 | 18.499998 | 1 |
CCGTCCG | 50 | 0.0070282193 | 18.499998 | 28 |
ACGATTA | 50 | 0.0070282193 | 18.499998 | 23 |