ERR1632886.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632886.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	352451
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1496	0.42445616553790455	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1223	0.34699858987490456	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	620	0.17591097769619038	No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG	417	0.11831431886985709	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	417	0.11831431886985709	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	394	0.11178858905209518	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA	390	0.11065367951857137	No Hit
GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCAC	357	0.10129067586699995	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	750	0.0	22.693335	1
TTCGCCG	60	3.7168575E-5	21.583334	24
GGTATCA	345	0.0	21.449274	1
TGGGGCG	45	0.0038206265	20.555553	37
ACGGTAC	45	0.0038206265	20.555553	3
ACGGGTC	55	5.1333755E-4	20.181818	16
GCCGCTC	65	6.884789E-5	19.923077	27
GTCGCCC	85	1.2403016E-6	19.588236	37
GAGTTAG	120	5.136826E-9	18.5	26
CGGAGTT	120	5.136826E-9	18.5	24
TCACGGT	50	0.007025445	18.499998	1
CACGGTA	50	0.007025445	18.499998	2
CGCGGTA	50	0.007025445	18.499998	12
TTCCGAT	50	0.007025445	18.499998	16
CTTGGAC	50	0.007025445	18.499998	3
AATAGCG	145	1.5279511E-10	17.862068	6
CGTATTA	125	8.518327E-9	17.76	2
ATTACCG	125	8.518327E-9	17.76	5
GTTAGCC	125	8.518327E-9	17.76	28
AGTTAGC	125	8.518327E-9	17.76	27