ERR1632876.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632876.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	356995
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	868	0.2431406602333366	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	587	0.16442807322231404	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	579	0.162187145478228	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	504	0.14117844787742126	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	471	0.1319346209330663	No Hit
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA	462	0.1294135772209695	No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG	455	0.12745276544489417	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC	419	0.11736859059650695	No Hit
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA	400	0.11204638720430259	No Hit
ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT	399	0.11176627123629182	No Hit
CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC	386	0.108124763652152	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC	363	0.1016820963879046	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	359	0.10056163251586157	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	210	0.0	29.952383	1
CTTCCGG	25	0.0054913303	29.6	22
CCTAGTC	25	0.0054913303	29.6	2
CTTCGGT	40	0.0019285936	23.125002	12
GCTAACT	40	0.0019285936	23.125002	2
GTATCAA	600	0.0	23.125	1
CGAACCG	50	2.6970476E-4	22.2	31
GCGAACC	50	2.6970476E-4	22.2	30
CTAGTAA	50	2.6970476E-4	22.2	30
AACCGGG	55	5.133553E-4	20.181818	33
GAGTAGT	55	5.133553E-4	20.181818	1
CCCTTGA	55	5.133553E-4	20.181818	1
ATTGCCG	55	5.133553E-4	20.181818	11
GGCGAAC	55	5.133553E-4	20.181818	29
TCCTATA	65	6.885106E-5	19.923077	2
TATTGTC	95	1.6680497E-7	19.473684	5
TTAACGG	95	1.6680497E-7	19.473684	35
GCACCGC	105	2.246452E-8	19.380953	10
GTCGCCC	90	2.14377E-6	18.5	37
ACAGTCC	50	0.007025615	18.5	8