ERR1632872.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632872.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	440691
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1508	0.34218987907626885	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1000	0.22691636543519153	No Hit
GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA	791	0.17949084505923651	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	479	0.10869293904345677	No Hit
GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA	455	0.10324694627301216	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCGAC	20	0.0018407047	37.0	31
GGTATCA	340	0.0	25.029411	1
TTGCCGA	40	0.001929308	23.125	10
GCCGTTA	50	2.6984393E-4	22.2	15
CCGTTAA	50	2.6984393E-4	22.2	16
GCCGCGT	60	3.7195787E-5	21.583332	36
ATGCCGC	60	3.7195787E-5	21.583332	34
TGCCGCG	60	3.7195787E-5	21.583332	35
GTATCAA	1000	0.0	21.46	1
AGACTGC	55	5.1361776E-4	20.18182	6
GGTACCG	55	5.1361776E-4	20.18182	6
TGCCCGC	65	6.889792E-5	19.923077	30
CGTGCTA	60	9.224501E-4	18.5	34
ACGTGCT	60	9.224501E-4	18.5	33
CGGGATA	60	9.224501E-4	18.5	17
CGCAGAA	70	1.2170332E-4	18.5	29
TCTCCGA	60	9.224501E-4	18.5	11
CCGCGTG	70	1.2170332E-4	18.5	37
GTAAGAT	75	2.0636241E-4	17.266666	3
GGCCGTT	65	0.0015778445	17.076923	14