ERR1632870.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632870.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	562594
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1545	0.2746207744839085	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1221	0.21703039847563252	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	838	0.14895288609547916	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	743	0.13206681905601553	No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG	733	0.13028933831501935	No Hit
GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC	671	0.1192689577208431	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	663	0.11784697312804616	No Hit
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA	647	0.11500300394245229	No Hit
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA	619	0.11002605786766301	No Hit
CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGC	588	0.10451586757057488	No Hit
CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC	580	0.10309388297777794	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	755	0.0	26.463573	1
ATAGCGG	35	8.8637427E-4	26.428572	7
CGCAATC	35	8.8637427E-4	26.428572	12
CGTTTAG	85	1.9717845E-9	23.941177	26
GGTATCA	235	0.0	23.617022	1
GGTCTAG	40	0.0019299678	23.125002	1
TACGTTA	40	0.0019299678	23.125002	19
GCGTTTA	90	3.8180588E-9	22.61111	25
CGCTAAG	45	0.003823417	20.555555	35
TTTGCCG	45	0.003823417	20.555555	27
AATAGCG	45	0.003823417	20.555555	6
GACTATT	45	0.003823417	20.555555	7
TGCGTTA	100	1.2862074E-8	20.35	37
CACGAGG	65	6.894123E-5	19.923079	14
ATGCGTT	95	1.6723061E-7	19.473684	36
GTATTAG	115	3.0413503E-9	19.304348	1
GCGCAAT	50	0.0070305266	18.5	11
CGAGGGT	60	9.2288275E-4	18.5	16
TATTAGC	80	1.61428E-5	18.5	2
ACTAAGT	50	0.0070305266	18.5	8