Basic Statistics
Measure | Value |
---|---|
Filename | ERR1632855.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 428731 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 1995 | 0.4653267433425621 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1425 | 0.33237624524468723 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 762 | 0.17773382377294855 | No Hit |
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC | 676 | 0.1576746258143218 | No Hit |
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT | 672 | 0.15674163986275777 | No Hit |
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC | 648 | 0.15114372415337354 | No Hit |
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA | 646 | 0.15067723117759155 | No Hit |
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG | 564 | 0.13155101917052883 | No Hit |
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA | 546 | 0.12735258238849068 | No Hit |
ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT | 535 | 0.1247868710216896 | No Hit |
CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC | 500 | 0.1166232439455043 | No Hit |
GTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTAT | 469 | 0.10939260282088303 | No Hit |
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA | 469 | 0.10939260282088303 | No Hit |
GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC | 464 | 0.10822637038142799 | No Hit |
CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG | 457 | 0.10659364496619092 | No Hit |
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA | 450 | 0.10496091955095387 | No Hit |
ATTCAAGATCATCTTCACAACATCACCTGCTAGCCACGTGGGA | 448 | 0.10449442657517186 | No Hit |
CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGC | 432 | 0.10076248276891572 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGGTGG | 20 | 0.0018406489 | 37.0 | 3 |
CGGGACG | 25 | 0.0054925475 | 29.6 | 17 |
GGTATCA | 365 | 0.0 | 28.383562 | 1 |
CGAGTCG | 50 | 9.073738E-6 | 25.900002 | 21 |
CCGTCCG | 45 | 1.3213225E-4 | 24.666666 | 28 |
GTATCAA | 1050 | 0.0 | 23.785713 | 1 |
GCGAGTC | 55 | 1.8990528E-5 | 23.545454 | 20 |
GTCGCCC | 40 | 0.001929223 | 23.125002 | 37 |
GTACTAT | 50 | 2.6982743E-4 | 22.2 | 1 |
CGTCCGC | 50 | 2.6982743E-4 | 22.2 | 29 |
GCCGCTC | 85 | 5.1615643E-8 | 21.764706 | 27 |
CGCCGTC | 60 | 3.7192738E-5 | 21.583334 | 26 |
GGCGAGT | 60 | 3.7192738E-5 | 21.583334 | 19 |
CGATCTG | 60 | 3.7192738E-5 | 21.583334 | 10 |
TATCACT | 165 | 0.0 | 21.30303 | 4 |
GAGTCGC | 70 | 5.0896197E-6 | 21.142857 | 22 |
GTCCGCC | 55 | 5.135866E-4 | 20.181818 | 30 |
TCGCCGT | 65 | 6.8892376E-5 | 19.923077 | 25 |
CTAAGAG | 65 | 6.8892376E-5 | 19.923077 | 3 |
GTCCGGC | 65 | 6.8892376E-5 | 19.923077 | 15 |