ERR1632801.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632801.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	289358
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1410	0.48728564615459047	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1030	0.35596043655264414	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	479	0.1655388826298219	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	358	0.12372217115130739	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	337	0.1164647253575156	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	326	0.1126632061321961	No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG	309	0.10678813096579325	No Hit
ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT	300	0.1036777970541682	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACCAT	25	0.005489632	29.6	6
GGTATCA	185	0.0	28.0	1
GCCGCTC	35	8.853296E-4	26.428572	27
GAGTCGC	50	9.060426E-6	25.900002	22
CACGTAG	65	9.341056E-8	25.615385	26
GTATCAA	570	0.0	24.666666	1
TCACGTA	70	1.9125946E-7	23.785715	25
CGAGTCG	55	1.8962875E-5	23.545454	21
AGCTTCG	55	1.8962875E-5	23.545454	21
GCTTCGC	55	1.8962875E-5	23.545454	22
CGCTCTC	40	0.001927716	23.125	29
GGGGTTA	40	0.001927716	23.125	6
TCCGCCG	65	2.6713424E-6	22.76923	31
CGTTGGT	50	2.6953363E-4	22.2	24
CGCCGTC	50	2.6953363E-4	22.2	26
GCCGTCC	60	3.713896E-5	21.583334	27
TCCGGCG	70	5.080181E-6	21.142859	16
CGTAGGA	80	6.9231464E-7	20.8125	28
ACGTAGG	80	6.9231464E-7	20.8125	27
CTAAACA	45	0.0038189963	20.555555	4