ERR1632776.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632776.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	419467
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1365	0.3254129645478667	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	905	0.21574998748411675	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	536	0.12778120805689125	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	507	0.12086767254635049	No Hit
GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC	501	0.11943728588899724	No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG	481	0.11466933036448637	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG	449	0.10704060152526898	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	434	0.10346463488188583	No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC	429	0.10227264600075811	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA	425	0.10131905489585594	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCGT	20	0.0018406039	37.0	25
CGTCCGC	20	0.0018406039	37.0	29
AGTCGCC	20	0.0018406039	37.0	23
CCGTCCG	25	0.005492413	29.6	28
ACCGTTC	25	0.005492413	29.6	8
CGCCGTC	25	0.005492413	29.6	26
GGTATCA	330	0.0	29.151514	1
CGAGTCG	35	8.859967E-4	26.428572	21
TTAGACT	40	0.0019291542	23.125	4
TATTCGA	40	0.0019291542	23.125	15
GTATCAA	905	0.0	22.486189	1
TTAACGG	60	3.7190286E-5	21.583332	35
ATTCGAG	45	0.0038218184	20.555557	16
TTACATA	45	0.0038218184	20.555557	4
TACACCC	55	5.135614E-4	20.181818	5
TAAACCG	50	0.007027616	18.5	5
CCTACAC	100	2.8641261E-7	18.5	3
GTTAGTA	80	1.6126853E-5	18.5	27
TTATCGA	50	0.007027616	18.5	31
CGTTAAA	50	0.007027616	18.5	17