ERR1632724.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632724.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42183
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCCGTCTT	140	0.3318872531588554	TruSeq Adapter, Index 6 (95% over 21bp)
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	74	0.1754261195268236	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	56	0.1327549012635422	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	52	0.1232724083161463	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	50	0.11853116184244838	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	48	0.11378991536875045	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	46	0.10904866889505249	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	45	0.10667804565820355	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	44	0.10430742242135457	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	43	0.10193679918450561	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCAAA	20	0.0018218949	37.0	37
AAGGCCG	20	0.0018218949	37.0	5
TGAGCAA	20	0.0018218949	37.0	36
AATGAGC	25	1.21356476E-4	37.0	34
GGTATCA	50	6.9831003E-9	33.300003	1
CCGTCTT	35	2.3345721E-5	31.714285	37
CAATGAG	25	0.005437223	29.6	33
GTCGTCA	25	0.005437223	29.6	20
TCAATGA	25	0.005437223	29.6	32
TCGTCAC	25	0.005437223	29.6	21
TCACCAA	25	0.005437223	29.6	24
GCCGTCT	40	5.8075413E-5	27.750002	36
TACGGGG	35	8.727856E-4	26.42857	15
TATGCCG	45	1.2939137E-4	24.666666	33
CCAATCC	40	0.0019006592	23.125002	27
GCGGTAA	40	0.0019006592	23.125002	23
TTCTGCG	40	0.0019006592	23.125002	18
GCTGTCG	40	0.0019006592	23.125002	17
CGGTGCT	40	0.0019006592	23.125002	9
TAATACG	40	0.0019006592	23.125002	27