ERR1632721.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632721.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	86986
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	178	0.20463063021635666	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	159	0.18278803485618375	No Hit
GTGCAGGAGGCGGCGGGTGTGGGGCTGCCTGCGGGCTGCGTCT	154	0.17703998344561195	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	137	0.15749660864966775	No Hit
TCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTT	133	0.1528981675212103	RNA PCR Primer, Index 41 (95% over 22bp)
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	128	0.1471501161106385	No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGGTCTT	116	0.13335479272526615	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	109	0.1253075207504656	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	104	0.11955946933989378	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	103	0.11840985905777941	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	96	0.11036258708297887	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	92	0.10576414595452141	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	88	0.10116570482606396	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	88	0.10116570482606396	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	88	0.10116570482606396	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	88	0.10116570482606396	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	88	0.10116570482606396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGGTC	25	1.2242646E-4	37.0	4
GGTCTTC	20	0.0018325954	37.0	7
GGTATCA	85	0.0	32.64706	1
TCGTCTT	25	0.005468791	29.6	14
AGGGTCT	35	8.803355E-4	26.42857	5
GTATCAA	115	0.0	24.130436	2
CCATAGG	40	0.0019169436	23.125002	1
CCAGGAC	50	2.6743714E-4	22.2	3
TCCAGGA	60	3.675559E-5	21.583334	2
TTCTGCG	45	0.00379786	20.555557	18
TCTGCGG	50	0.006983984	18.5	19
AACGTCA	50	0.006983984	18.5	28
CGGGTAA	50	0.006983984	18.5	23
TGCGGGT	50	0.006983984	18.5	21
CTTATAC	110	3.731293E-8	18.5	37
AATGAGC	50	0.006983984	18.5	34
CAATGAG	50	0.006983984	18.5	33
GTAACGT	50	0.006983984	18.5	26
CTCTTAT	295	0.0	15.677966	37
CCCCAAT	155	6.9048838E-9	15.516129	1