ERR1632572.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632572.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	54788
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	204	0.37234430897276777	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	158	0.2883843177338103	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	130	0.2372782361100971	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	129	0.23545301890925022	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	111	0.20259910929400599	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	108	0.19712345769146528	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	106	0.19347302328977148	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	104	0.18982258888807768	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	103	0.1879973716872308	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	102	0.18617215448638388	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	102	0.18617215448638388	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	99	0.18069650288384317	No Hit
TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT	92	0.16791998247791487	RNA PCR Primer, Index 39 (95% over 23bp)
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	91	0.16609476527706798	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	89	0.16244433087537416	No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTC	87	0.15879389647368036	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	84	0.15331824487113968	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	79	0.14419215886690515	No Hit
GGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC	78	0.14236694166605826	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	78	0.14236694166605826	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	77	0.14054172446521135	No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC	73	0.13324085566182375	No Hit
GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA	72	0.13141563846097687	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT	71	0.12959042126012996	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	70	0.12776520405928304	No Hit
GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC	67	0.12228955245674235	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG	65	0.11863911805504855	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA	63	0.11498868365335474	No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA	63	0.11498868365335474	No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA	61	0.11133824925166096	No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC	60	0.10951303205081406	No Hit
TTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC	60	0.10951303205081406	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG	59	0.10768781484996715	No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA	59	0.10768781484996715	No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA	58	0.10586259764912025	No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG	58	0.10586259764912025	No Hit
GATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCAC	57	0.10403738044827335	No Hit
GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAA	56	0.10221216324742644	No Hit
CCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAA	56	0.10221216324742644	No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC	56	0.10221216324742644	No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT	56	0.10221216324742644	No Hit
CTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTAT	56	0.10221216324742644	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT	55	0.10038694604657954	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	50	2.6416274E-7	29.6	1
CGTGCCA	100	0.0	25.900002	10
GCGGTAA	100	2.0008883E-11	24.050001	23
CGCGGTA	100	2.0008883E-11	24.050001	22
TACGGAG	85	1.873559E-9	23.941175	30
ATACGGA	85	1.873559E-9	23.941175	29
GCAGCCG	110	1.8189894E-12	23.545454	17
TGCCAGC	110	1.8189894E-12	23.545454	12
TCCGTGC	110	1.8189894E-12	23.545454	8
AGCCGCG	110	1.8189894E-12	23.545454	19
ATACACA	55	1.8601251E-5	23.545454	37
GTGCCAG	110	1.8189894E-12	23.545454	11
CAGCCGC	110	1.8189894E-12	23.545454	18
TAATACG	95	2.6375346E-10	23.368422	27
AATACGG	95	2.6375346E-10	23.368422	28
CCGTGCC	120	0.0	23.125002	9
GGTAATA	105	3.6379788E-11	22.904764	25
CCGCGGT	105	3.6379788E-11	22.904764	21
AACTCCG	115	5.456968E-12	22.52174	5
GTACTGG	50	2.65684E-4	22.2	1

Summary

Basic Statistics

Per base sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content