FastQCFastQC Report
Fri 10 Feb 2017
ERR1632550.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632550.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9430
Sequences flagged as poor quality0
Sequence length43
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTT360.38176033934252385TruSeq Adapter, Index 10 (95% over 21bp)
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA160.1696712619300106No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG150.15906680805938495No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC130.1378579003181336No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT120.12725344644750797No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC120.12725344644750797No Hit
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA120.12725344644750797No Hit
CATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTC110.11664899257688228No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA110.11664899257688228No Hit
GGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC110.11664899257688228No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG100.10604453870625664No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)