ERR1632549.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632549.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27995
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	69	0.24647258439006964	No Hit
TCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT	62	0.2214681193070191	TruSeq Adapter, Index 7 (95% over 21bp)
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	51	0.1821753884622254	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	47	0.16788712270048223	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	43	0.15359885693873906	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	38	0.13573852473656012	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	36	0.12859439185568852	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	34	0.12145025897481693	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	34	0.12145025897481693	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	32	0.11430612609394536	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	32	0.11430612609394536	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT	31	0.11073405965350955	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	31	0.11073405965350955	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	28	0.10001786033220217	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	28	0.10001786033220217	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGGTAA	35	8.653868E-4	26.428572	23
AATACGG	45	1.2786625E-4	24.666666	28
AGCCGCG	45	1.2786625E-4	24.666666	19
CCAGCAG	55	1.8180652E-5	23.545454	14
TAATACG	40	0.0018846996	23.125002	27
TCTTATA	40	0.0018846996	23.125002	37
CGGTAAT	40	0.0018846996	23.125002	24
GTATCAA	50	2.6118534E-4	22.199999	1
CAGCAGC	60	3.5617566E-5	21.583334	15
AGCAGCC	60	3.5617566E-5	21.583334	16
TAGCCGG	45	0.0037345833	20.555555	5
CGCGGTA	45	0.0037345833	20.555555	22
GTAATAC	45	0.0037345833	20.555555	26
GGTAATA	45	0.0037345833	20.555555	25
CCGCGGT	45	0.0037345833	20.555555	21
CCGTGCC	55	4.9726915E-4	20.181818	9
GCCAGCA	55	4.9726915E-4	20.181818	13
AACTCCG	55	4.9726915E-4	20.181818	5
TAACTCC	55	4.9726915E-4	20.181818	4
CTAACTC	55	4.9726915E-4	20.181818	3