##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1632509.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1664562 Sequences flagged as poor quality 0 Sequence length 43 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.06955883890176 34.0 33.0 34.0 31.0 34.0 2 33.20019921156436 34.0 33.0 34.0 31.0 34.0 3 33.27853753720198 34.0 34.0 34.0 31.0 34.0 4 36.549049539758805 37.0 37.0 37.0 35.0 37.0 5 36.519095113309085 37.0 37.0 37.0 35.0 37.0 6 36.564175440746574 37.0 37.0 37.0 35.0 37.0 7 36.564708914417125 37.0 37.0 37.0 35.0 37.0 8 36.54190111272515 37.0 37.0 37.0 35.0 37.0 9 38.3310456444398 39.0 39.0 39.0 37.0 39.0 10 38.3692995514736 39.0 39.0 39.0 37.0 39.0 11 38.434253575415035 39.0 39.0 39.0 37.0 39.0 12 38.39760249242744 39.0 39.0 39.0 37.0 39.0 13 38.43247893439836 39.0 39.0 39.0 37.0 39.0 14 40.0002054594542 41.0 40.0 41.0 38.0 41.0 15 39.99590823291653 41.0 40.0 41.0 38.0 41.0 16 39.9599726534668 41.0 40.0 41.0 38.0 41.0 17 39.96446752959638 41.0 40.0 41.0 38.0 41.0 18 39.96026342064759 41.0 40.0 41.0 38.0 41.0 19 39.957905442993415 41.0 40.0 41.0 38.0 41.0 20 39.934811680189746 41.0 40.0 41.0 38.0 41.0 21 39.9038690057805 41.0 40.0 41.0 38.0 41.0 22 39.87694961197 41.0 40.0 41.0 38.0 41.0 23 39.849594067388296 41.0 40.0 41.0 38.0 41.0 24 39.82880301244411 41.0 40.0 41.0 38.0 41.0 25 39.78323126444074 41.0 40.0 41.0 38.0 41.0 26 39.70477639162735 41.0 40.0 41.0 38.0 41.0 27 39.62489111249686 41.0 40.0 41.0 37.0 41.0 28 39.58585561847501 41.0 40.0 41.0 37.0 41.0 29 39.554392687085254 41.0 40.0 41.0 37.0 41.0 30 39.51343056011131 41.0 40.0 41.0 37.0 41.0 31 39.449372868057786 41.0 39.0 41.0 37.0 41.0 32 39.41626746255171 41.0 39.0 41.0 36.0 41.0 33 39.33907117908495 41.0 39.0 41.0 36.0 41.0 34 39.30785455873677 41.0 39.0 41.0 36.0 41.0 35 39.22721352523967 41.0 39.0 41.0 35.0 41.0 36 39.17623494949422 41.0 39.0 41.0 35.0 41.0 37 39.11855971721089 41.0 39.0 41.0 35.0 41.0 38 39.039121402507085 41.0 39.0 41.0 35.0 41.0 39 38.947454044967984 41.0 39.0 41.0 35.0 41.0 40 38.863589941377974 40.0 39.0 41.0 35.0 41.0 41 38.804430234500124 40.0 38.0 41.0 35.0 41.0 42 38.731263839977125 40.0 38.0 41.0 35.0 41.0 43 37.999272481289374 40.0 37.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 1.0 13 1.0 14 3.0 15 7.0 16 10.0 17 8.0 18 19.0 19 34.0 20 78.0 21 138.0 22 277.0 23 523.0 24 846.0 25 1291.0 26 1878.0 27 2564.0 28 3606.0 29 5219.0 30 6841.0 31 9033.0 32 11968.0 33 16120.0 34 24037.0 35 38374.0 36 60466.0 37 118770.0 38 321378.0 39 1041068.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 44.08937606409374 15.988830695402154 11.975762993508202 27.946030246995907 2 21.9055823694161 18.724144850116726 30.79903301889626 28.57123976157091 3 22.428242384483124 19.09469277804011 27.748801186137857 30.72826365133891 4 16.341055484866292 14.833091227602216 32.87261153384494 35.953241753686555 5 17.975779814750066 32.16191406508139 32.52284985479664 17.33945626537191 6 36.15906166306812 32.26194037830973 14.464225423865257 17.11477253475689 7 31.11172788997947 26.735141136226826 19.088985570979034 23.064145402814674 8 28.53909917443748 29.147667674739665 19.459533498902417 22.853699651920444 9 28.073931761027826 12.952416311317933 17.28424654653897 41.68940538111527 10 20.299333998973903 22.716846834182206 28.98864686325892 27.99517230358497 11 39.57599656846666 19.43111761532463 18.309861693346356 22.68302412286235 12 24.338955232667814 22.974271910568667 25.460871989147897 27.22590086761563 13 35.67485020083361 17.31770880267602 20.15929716045422 26.848143836036147 14 24.882581724201323 19.22860187845211 22.05294846331948 33.83586793402709 15 29.773417872088874 23.87444865375997 19.395612779818354 26.956520694332802 16 26.526918192293223 23.315743120412456 21.84178180205964 28.31555688523467 17 27.68812456369904 22.682663667679545 21.18347048653039 28.445741282091024 18 26.890677547607115 21.103389360083913 23.056095237065367 28.949837855243604 19 29.356671604902672 21.66113367961061 22.689392164425236 26.292802551061477 20 30.466573188622593 20.443756375551043 21.573242690870032 27.516427744956328 21 28.091894444304266 21.458197411691486 21.86184714056911 28.58806100343514 22 28.764383663690506 22.22482550965359 21.17067432754082 27.84011649911508 23 28.836414624387675 21.43861268009242 21.605383278003462 28.119589417516437 24 28.353464755292983 21.200111500803214 22.26844058677298 28.177983157130825 25 28.842121831448754 21.795943917979624 21.8831139963546 27.478820254217023 26 28.690189971896512 22.09331944379362 21.810962883929825 27.405527700380038 27 27.82744049185311 21.029135592426115 23.149152750092817 27.994271165627953 28 26.95994501856945 22.632260017950667 21.37553302310157 29.032261940378312 29 28.151910232241274 23.04756446440565 21.676813480062624 27.123711823290453 30 28.08919103043323 21.37391097477895 22.573025216243074 27.963872778544747 31 27.713897109269585 22.167813514906623 22.47390004097174 27.64438933485205 32 26.14105091910064 21.427799024608277 22.47744451693599 29.953705539355095 33 26.370961249866333 21.869416699408013 23.480050607907664 28.279571442817993 34 27.487591330331945 20.78690970958126 23.174264461161556 28.551234498925243 35 26.543919661748856 22.04195458024393 23.410002150715925 28.004123607291287 36 26.445395245115535 21.38418394748889 24.65098926924921 27.51943153814637 37 26.982713770949957 20.269055763618297 24.542251955769746 28.205978509662 38 26.456449204054884 20.1203680007113 25.074163653862097 28.349019141371723 39 25.440025664409017 19.263866410503184 26.76602013022044 28.53008779486736 40 25.196898643607145 19.9566011959903 27.272940268971656 27.5735598914309 41 23.33088223809026 19.655861421803454 28.393655508175726 28.619600831930565 42 22.235038406499726 20.352320910846217 29.387190143713482 28.02545053894057 43 22.291810097791494 20.83671260067213 28.36253621072691 28.508941090809476 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 34.0 1 27.5 2 21.0 3 50.0 4 79.0 5 79.0 6 113.5 7 148.0 8 137.5 9 127.0 10 211.0 11 295.0 12 295.0 13 550.5 14 806.0 15 1316.5 16 1827.0 17 1763.0 18 1699.0 19 1699.0 20 2140.0 21 2581.0 22 2229.0 23 1877.0 24 2228.0 25 2579.0 26 2579.0 27 3056.0 28 3533.0 29 4496.0 30 5459.0 31 7095.0 32 8731.0 33 8731.0 34 12014.0 35 15297.0 36 17493.5 37 19690.0 38 26006.0 39 32322.0 40 32322.0 41 39002.0 42 45682.0 43 55070.5 44 64459.0 45 84055.0 46 103651.0 47 103651.0 48 121213.5 49 138776.0 50 154147.5 51 169519.0 52 174078.5 53 178638.0 54 178638.0 55 169750.0 56 160862.0 57 155580.0 58 150298.0 59 148842.0 60 147386.0 61 147386.0 62 136095.5 63 124805.0 64 108283.5 65 91762.0 66 79653.0 67 67544.0 68 67544.0 69 59013.5 70 50483.0 71 42036.0 72 33589.0 73 26394.5 74 19200.0 75 19200.0 76 14082.0 77 8964.0 78 7095.5 79 5227.0 80 4147.0 81 3067.0 82 3067.0 83 2428.0 84 1789.0 85 1371.0 86 953.0 87 703.0 88 453.0 89 453.0 90 338.0 91 223.0 92 152.0 93 81.0 94 52.0 95 23.0 96 23.0 97 16.0 98 9.0 99 11.5 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1664562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.70894919403457 #Duplication Level Percentage of deduplicated Percentage of total 1 84.20152598315758 33.43554117325385 2 8.188016328714985 6.502750487937376 3 2.3124435489576003 2.7547411019889103 4 1.1201398563825589 1.7791830658923282 5 0.7098650975558319 1.409399854673146 6 0.4962220674877922 1.182267412009892 7 0.3444926214420656 0.9575608001793936 8 0.27158977047464494 0.8627635517917749 9 0.21558919100615673 0.7704738209201843 >10 1.6588149818605717 13.28887029728865 >50 0.22999514217151257 6.489081819539509 >100 0.21555677836553122 17.667366659108037 >500 0.02525222545648371 6.74771087082864 >1k 0.010496406966851663 6.1522890845883484 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA 4115 0.24721217954032354 No Hit GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA 3227 0.19386481248520632 No Hit ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA 2538 0.15247254232644983 No Hit CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA 2515 0.15109079745903126 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 2284 0.13721327292104468 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 2217 0.13318819004639057 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 2136 0.12832204507852515 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 1945 0.11684755509257089 No Hit TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA 1924 0.11558596195275395 No Hit CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA 1840 0.1105395893934861 No Hit GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG 1805 0.10843693416045784 No Hit ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA 1798 0.10801640311385216 No Hit CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC 1785 0.10723541688444167 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 1740 0.10453200301340532 No Hit CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT 1728 0.10381109264779563 No Hit TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT 1716 0.10309018228218593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 6.007586380080766E-5 0.0 0.0 0.0 0.0 9 1.2015172760161532E-4 0.0 0.0 0.0 0.0 10 2.4030345520323064E-4 0.0 0.0 6.007586380080766E-5 0.0 11 2.4030345520323064E-4 0.0 0.0 6.007586380080766E-5 0.0 12 2.4030345520323064E-4 0.0 0.0 6.007586380080766E-5 0.0 13 2.4030345520323064E-4 0.0 0.0 1.2015172760161532E-4 0.0 14 2.4030345520323064E-4 0.0 0.0 1.8022759140242297E-4 0.0 15 2.4030345520323064E-4 0.0 0.0 3.6045518280484594E-4 0.0 16 2.4030345520323064E-4 0.0 0.0 6.007586380080766E-4 6.007586380080766E-5 17 3.003793190040383E-4 0.0 0.0 8.410620932113072E-4 6.007586380080766E-5 18 3.003793190040383E-4 6.007586380080766E-5 0.0 0.0010212896846137302 6.007586380080766E-5 19 3.6045518280484594E-4 6.007586380080766E-5 0.0 0.0012015172760161531 6.007586380080766E-5 20 3.6045518280484594E-4 6.007586380080766E-5 0.0 0.0018022759140242299 6.007586380080766E-5 21 3.6045518280484594E-4 6.007586380080766E-5 0.0 0.003184020781442806 6.007586380080766E-5 22 4.205310466056536E-4 6.007586380080766E-5 0.0 0.004926220831666228 6.007586380080766E-5 23 4.205310466056536E-4 6.007586380080766E-5 0.0 0.005707207061076728 1.2015172760161532E-4 24 4.205310466056536E-4 6.007586380080766E-5 0.0 0.007869938157905803 1.2015172760161532E-4 25 4.205310466056536E-4 6.007586380080766E-5 0.0 0.009732289935730842 1.2015172760161532E-4 26 4.205310466056536E-4 6.007586380080766E-5 0.0 0.01435813144839303 1.8022759140242297E-4 27 4.205310466056536E-4 6.007586380080766E-5 0.0 0.042293408115768594 1.8022759140242297E-4 28 4.205310466056536E-4 1.8022759140242297E-4 0.0 0.1615439977603718 1.8022759140242297E-4 29 4.205310466056536E-4 1.8022759140242297E-4 0.0 0.3403898442953762 1.8022759140242297E-4 30 4.205310466056536E-4 1.8022759140242297E-4 0.0 0.5590659885303161 1.8022759140242297E-4 31 4.205310466056536E-4 1.8022759140242297E-4 0.0 1.1998952276935313 1.8022759140242297E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1970 0.0 28.17259 1 TTTTACG 65 2.6840462E-6 22.76923 4 ATCTTAC 150 0.0 22.2 1 ATACGGC 255 0.0 21.039215 29 TGTTTAC 130 3.274181E-11 19.923077 14 AACGACC 160 0.0 19.65625 37 GTATCAA 2815 0.0 19.45293 2 CTTATAC 2200 0.0 19.256819 37 CTAGACA 90 2.153396E-6 18.5 4 ATACACA 430 0.0 18.5 37 AGTATTA 135 1.1532393E-9 17.814816 15 TATACAC 655 0.0 17.793894 37 TACCTTA 125 8.58563E-9 17.760002 31 GCGGTAA 1595 0.0 17.514105 23 GGTAATA 1710 0.0 17.309942 25 CTCTATG 385 0.0 17.298702 1 TAATACG 1535 0.0 17.234528 27 GTTTAGG 120 1.0420081E-7 16.958332 1 CGTGCCA 1735 0.0 16.847261 10 AACGTCA 880 0.0 16.818182 28 >>END_MODULE