FastQCFastQC Report
Fri 10 Feb 2017
ERR1632485.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632485.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2418
Sequences flagged as poor quality0
Sequence length43
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTT170.7030603804797354TruSeq Adapter, Index 8 (95% over 22bp)
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA120.49627791563275436No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA80.3308519437551696No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA70.2894954507857734No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC70.2894954507857734No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA60.24813895781637718No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC60.24813895781637718No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA60.24813895781637718No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA60.24813895781637718No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT50.20678246484698098No Hit
GTCTCCTACGACTCCATGAGCAGCGCCAGCCCAGCTCTCCCCT50.20678246484698098No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG50.20678246484698098No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA50.20678246484698098No Hit
GCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCT50.20678246484698098No Hit
CGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCG40.1654259718775848No Hit
ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTA40.1654259718775848No Hit
GCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGG40.1654259718775848No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTT40.1654259718775848No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT40.1654259718775848No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG40.1654259718775848No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC40.1654259718775848No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT30.12406947890818859No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC30.12406947890818859No Hit
CACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATC30.12406947890818859No Hit
CACACTGATTCAGGCTCTGGGCTGCTCCCCGTTCGCTCGCCGC30.12406947890818859No Hit
GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC30.12406947890818859No Hit
CACTGGGTTTCCCCATTCGGAAATCGCCGGTTATAACGGTTCA30.12406947890818859No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT30.12406947890818859No Hit
CTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTTC30.12406947890818859RNA PCR Primer, Index 8 (95% over 23bp)
GATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCAC30.12406947890818859No Hit
GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCAC30.12406947890818859No Hit
CATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTC30.12406947890818859No Hit
ACGCTGGCCTTCTCGGGGTGGGGGTCCCCGCATGCTGCTGTCC30.12406947890818859No Hit
CTGTCACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAAC30.12406947890818859No Hit
CCCCAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAA30.12406947890818859No Hit
AGCTCACAGCATGTGCATTTTTGTGTACGGGGCTGTCACCCTG30.12406947890818859No Hit
GCTCTGGGCTGCTCCCCGTTCGCTCGCCGCTACTGGGGGAATC30.12406947890818859No Hit
TAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTA30.12406947890818859No Hit
GAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA30.12406947890818859No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG30.12406947890818859No Hit
CCCCCACCCCGAGAAGGCCAGCGTGTCCTCTTTGTGTCTTTTC30.12406947890818859No Hit
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGA30.12406947890818859No Hit
ACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCC30.12406947890818859No Hit
CATCAGGCTTGCGCCCATTGTGCAATATTCCCCACCTGTCTCT30.12406947890818859No Hit
TCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAAT30.12406947890818859No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT30.12406947890818859No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers