ERR1632423.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632423.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25065
Sequences flagged as poor quality	0
Sequence length	43
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	74	0.2952323957709954	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	67	0.26730500698184717	No Hit
TCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGTCTT	67	0.26730500698184717	RNA PCR Primer, Index 27 (95% over 23bp)
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	60	0.23937761819269898	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	51	0.20347097546379417	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	49	0.19549172152403752	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	46	0.18352284061440255	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	41	0.16357470576501096	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	40	0.15958507879513265	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	36	0.1436265709156194	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	36	0.1436265709156194	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	35	0.13963694394574108	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	35	0.13963694394574108	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	33	0.13165769000598446	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	30	0.11968880909634949	No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC	27	0.10771992818671454	No Hit
CGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCG	26	0.10373030121683623	No Hit
CCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACCGGCTAAC	26	0.10373030121683623	No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA	26	0.10373030121683623	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	26	0.10373030121683623	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	40	0.0018792378	23.125	1
CTCTTAT	60	3.542623E-5	21.583334	37
TCTCTTA	110	1.3425712E-5	15.136364	37
GTCTCTT	170	6.372003E-5	10.882353	37
CTGTCTC	305	3.3778633E-9	10.311476	37
CCTGTCT	170	0.008735002	8.705882	36
TGTCTCT	220	8.5367815E-4	8.409091	36