ERR1632422.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632422.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42141
Sequences flagged as poor quality	0
Sequence length	43
%GC	56

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	111	0.2634014380294725	No Hit
TCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTCTT	88	0.20882276168102323	Illumina PCR Primer Index 10 (95% over 22bp)
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	87	0.20644977575282977	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	86	0.20407678982463634	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	72	0.17085498682992808	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	65	0.15424408533257397	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	63	0.14949811347618708	No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTC	61	0.14475214161980018	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	60	0.14237915569160675	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	60	0.14237915569160675	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	57	0.1352601979070264	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	56	0.13288721197883296	No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC	51	0.12102228233786573	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	50	0.1186492964096723	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	49	0.11627631048147884	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	48	0.1139033245532854	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	48	0.1139033245532854	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCTCGG	20	0.0018218708	37.0	20
GCCGGAA	20	0.0018218708	37.0	27
TGGGAAA	20	0.0018218708	37.0	5
TCTGGGA	25	0.00543715	29.6	3
GGTATCA	45	3.889065E-6	28.777777	1
GTATCAA	65	6.702542E-5	19.923077	2
TCTTTAG	65	6.702542E-5	19.923077	1
CTTTAGT	70	1.1841892E-4	18.5	2
TTTAGTG	70	1.1841892E-4	18.5	3
AGTGACC	50	0.006925646	18.5	6
TCACTAA	60	9.036955E-4	18.5	31
CTTATAC	80	3.2868062E-4	16.1875	37
AGTACGG	105	8.923314E-6	15.857144	12
GAGTACG	105	8.923314E-6	15.857144	11
TATCAAC	105	8.923314E-6	15.857144	1
ACTTCAT	70	0.0025373073	15.857143	22
AACGCAG	110	1.3869385E-5	15.136364	5
ACTGTCT	100	1.0541924E-4	14.8	37
GTCACTA	75	0.0040177517	14.8	30
ACGCAGA	115	2.1115817E-5	14.478261	6