ERR1632404.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632404.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	99563
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	220	0.22096561975834395	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	216	0.21694806303546496	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	202	0.20288661450538853	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	187	0.18782077679459236	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	179	0.17978566334883442	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	163	0.16371543645731848	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	159	0.1596978797344395	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	148	0.1486495987465223	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	148	0.1486495987465223	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	146	0.1466408203850828	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	141	0.1416188744814841	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	136	0.13659692857788536	No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA	131	0.13157498267428663	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	123	0.12353986922852868	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	119	0.11952231250564968	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	118	0.11851792332492994	No Hit
TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT	107	0.10746964233701274	RNA PCR Primer, Index 39 (95% over 23bp)
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	102	0.10244769643341402	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGGGC	30	3.5761172E-4	30.833334	4
CTCTATG	30	3.5761172E-4	30.833334	1
TCTATGG	30	3.5761172E-4	30.833334	2
TGAGTAT	25	0.00547256	29.599998	3
AATCTGA	25	0.00547256	29.599998	24
TGTACTG	25	0.00547256	29.599998	10
GCATGTA	25	0.00547256	29.599998	7
GGTATCA	105	0.0	26.428574	1
CTATGGG	35	8.812376E-4	26.42857	3
ATACGGC	35	8.812376E-4	26.42857	29
GAACTCG	45	1.3113898E-4	24.666668	27
CCGTGCC	90	1.382432E-10	24.666668	9
CAATGAG	45	1.3113898E-4	24.666668	33
GCGGTAA	85	1.9226718E-9	23.941177	23
CGTGCCA	85	1.9226718E-9	23.941177	10
CCGCGGT	85	1.9226718E-9	23.941177	21
TGAGCAA	40	0.0019188902	23.125	36
CGCGGTA	90	3.7234713E-9	22.611113	22
CGGTAAT	90	3.7234713E-9	22.611113	24
AATGAGC	50	2.6781566E-4	22.199999	34