FastQCFastQC Report
Fri 10 Feb 2017
ERR1632390.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632390.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1752
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA50.28538812785388123No Hit
CAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCT30.17123287671232876No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT30.17123287671232876No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT30.17123287671232876No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGCTGTCT30.17123287671232876No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTT30.17123287671232876No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC30.17123287671232876No Hit
GTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTA30.17123287671232876No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA30.17123287671232876No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.17123287671232876No Hit
CTTCAAGACACAGAGGAGAAATCCAGATCATTCTCAGCTTCCC30.17123287671232876No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA30.17123287671232876No Hit
CTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTAT30.17123287671232876No Hit
TCGGTAAGGTGATATGAACCGTTATAACCGGCGATTTCCGAAT30.17123287671232876No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC30.17123287671232876No Hit
AATGTAAATTATTCCGATCTGACATATCTGCATTATAATAATA20.1141552511415525No Hit
CCTCAAGGGCACAACCTCCAAGTCGACATCGTTTACGGCGTGG20.1141552511415525No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT20.1141552511415525No Hit
CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC20.1141552511415525No Hit
CCATCCTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAAC20.1141552511415525No Hit
GCTGTAGTCACTGGTGAATGTGCCCTGTGAATGGCGCTTGTCC20.1141552511415525No Hit
CAGCATGTCTGCGGCCAAGTTCTTCAACAATGGCGACCTCTTC20.1141552511415525No Hit
GGAGTAAAGTTAATACCTTTGCTCATTGACGTTACCCGCAGAA20.1141552511415525No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT20.1141552511415525No Hit
CACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGT20.1141552511415525No Hit
GAGTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTAC20.1141552511415525No Hit
CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAG20.1141552511415525No Hit
CTCTAGAATAGGATTGCGCTGTTATCCCTAGGGTAACTTGTTC20.1141552511415525No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA20.1141552511415525No Hit
ATGAAGAAGGCCTTCGGGTTGTAAAGTACTTTCAGCGGGGAGG20.1141552511415525No Hit
TTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACTTCA20.1141552511415525No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT20.1141552511415525No Hit
GTGTACGGGGCTGTCACCCTGTATCGCGCGCCTTTCCAGACGC20.1141552511415525No Hit
CTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTCTTC20.1141552511415525RNA PCR Primer, Index 29 (95% over 24bp)
GCGCCATTCACAGGGCACATTCACCAGTGACTACAGCAAGTAT20.1141552511415525No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA20.1141552511415525No Hit
GATAGAAACCGACCTGGATTACTCCGGTCTGAACTCAGATCAC20.1141552511415525No Hit
CCTTCGGGTTGTAAAGTACTTTCAGCGGGGAGGAAGGGAGTAA20.1141552511415525No Hit
GAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA20.1141552511415525No Hit
CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG20.1141552511415525No Hit
ATTGAGGTCCTCTCAAATGCCTTGTCGAAGTCCAGCGCTCCAC20.1141552511415525No Hit
GGTATCAACGCAGAGTACGGGGGTTAAGCGACTAAGCGTACAC20.1141552511415525No Hit
GGATTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTAC20.1141552511415525No Hit
ACTTTCAGCGGGGAGGAAGGGAGTAAAGTTAATACCTTTGCTC20.1141552511415525No Hit
CTACTAAACCTGCATTAAAAATTTCGGTTGGGGCGACCTCGGA20.1141552511415525No Hit
CTCCAGGCGTGCCCAAGATTTTGTGCAGTGGTTGATGAATACC20.1141552511415525No Hit
GTACGGGGATTTCACATCTGACTTAACAAACCGCCTGCGTGCG20.1141552511415525No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT20.1141552511415525No Hit
GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT20.1141552511415525No Hit
CTGTTATCCCTAGGGTAACTTGTTCCGTTGGTCAAGTTATTGG20.1141552511415525No Hit
GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC20.1141552511415525No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACCTGTCTCTTAT20.1141552511415525No Hit
GTTAAGTCAGATGTGAAATCCCCGTACTCTGCGTTGATACCCT20.1141552511415525No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCT20.1141552511415525No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCAT20.1141552511415525No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG20.1141552511415525No Hit
TTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC20.1141552511415525No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)