ERR1632384.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632384.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	37610
Sequences flagged as poor quality	0
Sequence length	43
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	81	0.2153682531241691	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	75	0.19941504918904546	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	64	0.1701675086413188	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	50	0.1329433661260303	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	44	0.11699016219090666	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	44	0.11699016219090666	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	43	0.11433129486838607	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	41	0.10901356022334485	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	40	0.10635469290082426	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	40	0.10635469290082426	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	38	0.10103695825578304	No Hit
TCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTT	38	0.10103695825578304	RNA PCR Primer, Index 33 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	80	2.910383E-11	27.75	1
GGTAATA	45	1.290268E-4	24.666668	25
CTCTTAT	105	1.8189894E-12	24.666666	37
AGCCGCG	40	0.00189685	23.125	19
CCGTGCC	45	0.0037584265	20.555557	9
GCGGTAA	45	0.0037584265	20.555557	23
AACTCCG	45	0.0037584265	20.555557	5
GCAGCCG	45	0.0037584265	20.555557	17
CTAACTC	45	0.0037584265	20.555557	3
GCTAACT	45	0.0037584265	20.555557	2
CGCGGTA	45	0.0037584265	20.555557	22
CGTGCCA	45	0.0037584265	20.555557	10
GTATCAA	110	1.6007107E-9	20.181818	2
CTCCGTG	55	5.017095E-4	20.181818	7
TACGGAG	50	0.006912161	18.5	30
TAACTCC	50	0.006912161	18.5	4
ATACGGA	50	0.006912161	18.5	29
TAATACG	50	0.006912161	18.5	27
TCCGTGC	50	0.006912161	18.5	8
AATACGG	50	0.006912161	18.5	28