FastQCFastQC Report
Fri 10 Feb 2017
ERR1632348.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632348.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4373
Sequences flagged as poor quality0
Sequence length43
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGTCTT250.5716899153898924RNA PCR Primer, Index 17 (95% over 21bp)
CATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGTC70.1600731763091699No Hit
ACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCC60.13720557969357422No Hit
CGCCTGGAGTCCAGATACTTGCTGTAGTCACTGGTGAATGTGC50.11433798307797849No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)