FastQCFastQC Report
Fri 10 Feb 2017
ERR1632347.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632347.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111700
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC1310.11727842435094002No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT1130.10116383169203223No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAGTGG250.005475387429.68
ACTAGGT250.005475387429.628
CCTGACG250.005475387429.68
TTGGTTC400.001920351123.1250025
CCTTGCT400.001920351123.1250029
TCAGAAG450.003804546820.55555518
GTTCACA450.003804546820.5555558
GACAGGC555.103254E-420.1818187
GGTATCA1152.9649527E-919.3043481
AGTCCTT500.006996161318.56
TATACAC609.165848E-418.537
TGTTGGT650.001567894417.0769233
TCTTATA1851.8189894E-1217.037
GGTGTTG700.002572900115.8571431
GCTGGGT855.310514E-415.23529324
GTTCCCC750.004073641714.817
ACGAGGC750.004073641714.817
GAGGCTT750.004073641714.819
TAGAAGA908.1918767E-414.3888884
GTGTTGG800.006251801313.8750012
Produced by FastQC (version 0.11.5)