ERR1632345.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632345.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7326
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTT	478	6.5247065247065255	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGT	424	5.787605787605788	No Hit
CATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTC	316	4.313404313404313	No Hit
ACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCC	249	3.3988533988533987	No Hit
ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATG	180	2.457002457002457	No Hit
CTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTTC	105	1.4332514332514332	Illumina PCR Primer Index 7 (95% over 21bp)
CACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCG	67	0.9145509145509146	No Hit
ACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGT	24	0.32760032760032765	RNA PCR Primer, Index 41 (95% over 21bp)
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	23	0.313950313950314	No Hit
TATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTAT	17	0.23205023205023204	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	15	0.20475020475020475	No Hit
TTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTA	14	0.19110019110019108	No Hit
ATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCT	10	0.1365001365001365	RNA PCR Primer, Index 41 (95% over 23bp)
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8	0.10920010920010921	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACAC	35	4.6807327E-7	37.0	3
TTATACA	35	4.6807327E-7	37.0	2
CTTATAC	40	1.3316676E-6	32.375	1
CCGTCTT	45	1.1559407E-4	24.666666	37
GCCGTCT	45	1.1559407E-4	24.666666	36
GGTATCA	40	0.001754455	23.125	1
TACACAT	60	3.1169337E-5	21.583334	5
ATACACA	60	3.1169337E-5	21.583334	4
GTATCAA	45	0.0034788467	20.555555	2
TGCCGTC	85	2.173879E-5	17.411764	37
ATGCCGT	90	3.5542438E-5	16.444445	36
ACACATC	80	2.8435446E-4	16.1875	6
TATGCCG	95	5.6516787E-5	15.578948	35
CACATCT	85	4.5149226E-4	15.235294	7
ACATCTC	95	0.0010505334	13.631579	8
CGTATGC	115	2.8797513E-4	12.869565	33
GTATGCC	120	4.1286694E-4	12.333334	34
ATCTCCG	135	7.605806E-5	12.333334	2
CATCTCC	140	1.06944084E-4	11.892857	1
TCTCGTA	140	0.001509238	10.571428	30