ERR1632336.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632336.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7887
Sequences flagged as poor quality	0
Sequence length	43
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT	201	2.5484975275770254	TruSeq Adapter, Index 5 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT	115	1.4580956003550145	No Hit
CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC	86	1.090401927222011	No Hit
ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC	82	1.0396855585140106	No Hit
ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG	68	0.8621782680360086	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	50	0.6339546088500064	No Hit
CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC	48	0.6085964244960061	Illumina Paired End PCR Primer 2 (95% over 23bp)
CACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCG	32	0.4057309496640041	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	31	0.39305185748700394	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	26	0.3296563966020033	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19	0.2409027513630024	No Hit
GGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCG	14	0.1775072904780018	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTG	13	0.16482819830100165	No Hit
ATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCT	13	0.16482819830100165	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	10	0.12679092177000129	No Hit
ACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT	8	0.10143273741600102	No Hit
TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA	8	0.10143273741600102	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATCTCC	40	5.2343625E-5	27.75	1
ATCTCCG	45	1.16717696E-4	24.666666	2
GTATGCC	50	2.3858677E-4	22.2	34
ATCTCGT	50	2.3858677E-4	22.2	29
TATGCCG	50	2.3858677E-4	22.2	35
TCTCGTA	50	2.3858677E-4	22.2	30
CGTATGC	50	2.3858677E-4	22.2	33
CTCGTAT	50	2.3858677E-4	22.2	31
GATCTCG	55	4.5457418E-4	20.181818	28
TCGTATG	55	4.5457418E-4	20.181818	32
AGCCCAC	60	8.172153E-4	18.5	9
GAGCGAT	60	8.172153E-4	18.5	24
GCCCACG	60	8.172153E-4	18.5	10
ACTGAGC	60	8.172153E-4	18.5	21
TGCCGTC	60	8.172153E-4	18.5	37
CCACGAG	60	8.172153E-4	18.5	12
ACACTGA	60	8.172153E-4	18.5	19
CACTGAG	60	8.172153E-4	18.5	20
CCCACGA	60	8.172153E-4	18.5	11
GACACTG	70	1.0353765E-4	18.5	18