FastQCFastQC Report
Fri 10 Feb 2017
ERR1632330.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632330.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34906
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCAAGG200.001817592537.02
CTTAGAT250.00542453129.5999982
TAGATGT250.00542453129.5999984
GGTATCA400.001894121823.1250021
TCTTATA704.8722686E-621.14285937
CTCTTAT758.851257E-619.73333436
ATCAACG500.00690241318.4999984
GTCTCTT1751.9663275E-914.79999937
TCTCTTA1102.3511794E-413.45454535
GCTGTCT1100.00362203511.77272737
TGTCTCT2452.1641063E-710.57142836
CTGTCTC3502.7284841E-1110.57142837
CCTGTCT2452.7318276E-48.30612234
Produced by FastQC (version 0.11.5)