ERR1632301.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632301.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39155
Sequences flagged as poor quality	0
Sequence length	43
%GC	54

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTT	125	0.31924403013663644	TruSeq Adapter, Index 12 (95% over 22bp)
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC	90	0.22985570169837827	No Hit
CATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTC	63	0.16089899118886475	No Hit
GCCCTGGAGGGGTCCCTGCAGAAGCGTGGCATTGTGGAACAAT	59	0.1506831822244924	No Hit
AGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTGGT	57	0.14557527774230622	No Hit
GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG	56	0.14302132550121313	No Hit
GTGCAGGAGGCGGCGGGTGTGGGGCTGCCTGCGGGCTGCGTCT	54	0.13791342101902695	No Hit
CTGGGGACCTGACCCAGCCGCAGCCTTTGTGAACCAACACCTG	49	0.1251436598135615	No Hit
GCTTTATTCCATCTCTCTCGGTGCAGGAGGCGGCGGGTGTGGG	49	0.1251436598135615	No Hit
ATGCTGTACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTAC	48	0.1225897075724684	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	46	0.11748180309028222	No Hit
CTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCATCT	45	0.11492785084918913	No Hit
GTGCAGGAGGCGGCGGGTGTGGGGCTGCCTGCAGGCTGCGTCT	42	0.10726599412590986	No Hit
ACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCC	41	0.10471204188481677	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	50	6.9558155E-9	33.3	1
CCGTCTT	25	0.0054325396	29.599998	37
GCCGTCT	25	0.0054325396	29.599998	36
GGAACGA	25	0.0054325396	29.599998	19
GTATCAA	60	4.1030944E-8	27.749998	2
CAACGCA	70	1.8262472E-7	23.785713	6
AGGCTTC	40	0.0018982469	23.125	25
TCAACGC	75	3.553705E-7	22.2	5
ATCAACG	75	3.553705E-7	22.2	4
AACGCAG	80	6.614009E-7	20.8125	7
TATCAAC	80	6.614009E-7	20.8125	3
CGGGTGT	65	6.6871224E-5	19.923077	14
GCGGGTG	65	6.6871224E-5	19.923077	13
AGTACAT	75	8.896903E-6	19.733334	14
ACATGGG	80	1.5527106E-5	18.5	17
ACGCAGA	90	2.0463685E-6	18.5	8
GTACATG	80	1.5527106E-5	18.5	15
CAGAGTA	90	2.0463685E-6	18.5	11
AGAGTAC	90	2.0463685E-6	18.5	12
GAGTACA	80	1.5527106E-5	18.5	13