FastQCFastQC Report
Fri 10 Feb 2017
ERR1632295.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632295.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3374864
Sequences flagged as poor quality0
Sequence length43
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA11300.026.194691
CTTATAC34650.018.79365237
GACGTAT500.007037635418.51
GTATCAA19200.015.2239592
ACCGTCG2109.094947E-1214.976198
TATACAC11000.014.96818237
CGTTATT3550.014.591552
TACCGTC2450.014.346947
TCTTATA55750.014.23587437
GACGGAC4700.014.1702147
GTATAAA3150.014.0952381
GCGTTAT4500.013.5666671
ATCAACG29550.013.5228412
TCAACGC30100.013.4601343
ATAACGA2202.8558134E-1013.45454512
ATACCGT2651.8189894E-1213.2641526
CAACGCA30750.013.175614
CGTCGTA2254.0745363E-1013.15555610
CGTATTG3800.012.65789527
AGACGGA5700.012.6578956
Produced by FastQC (version 0.11.5)