FastQCFastQC Report
Fri 10 Feb 2017
ERR1632286.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632286.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187482
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCAC250.005484760329.623
GGTATCA1000.029.61
CGCACGG250.005484760329.625
CAGAGCT400.001925196423.1254
GTATCAA1457.2759576E-1219.137932
TGCATCA500.00701347318.514
TTTATTC752.0556622E-417.2666663
GCTTTAT700.002581656415.8571431
CTTATAC1601.0766598E-815.0312537
TCTCTTA5600.014.20535837
CCAGGAC950.001238283813.6315793
TCTTATA2457.2759576E-1213.59183637
TAGAGCT850.00936638513.0588254
CCGGCGT850.00936638513.05882526
GGGCATC850.00936638513.05882532
GCTGCGT1153.5523516E-412.86956535
CGGGTGT1653.7552072E-612.33333314
GTCTAGT1050.00262936112.33333332
GTCTCTT8100.011.87654337
TGCGTCT1257.169264E-411.84000137
Produced by FastQC (version 0.11.5)