FastQCFastQC Report
Fri 10 Feb 2017
ERR1632251.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632251.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424631
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGCGC250.0054924929.5999988
CGTACCC250.0054924929.5999983
ATGACGA358.8601495E-426.4285734
CTATATG451.3212934E-424.6666661
TATACTG451.3212934E-424.6666665
TACACAT451.3212934E-424.6666665
TTACACA450.003821895520.5555554
TAACCCG555.135757E-420.18181828
GCGGGTA656.889038E-519.92307723
GGTATCA2950.018.8135591
CGGGTAA701.21690115E-418.524
ACAGTAG609.223746E-418.58
GTATGCC500.00702775718.49999832
TAGGATA500.00702775718.4999984
TGCGTAC500.00702775718.49999816
TAGTCCT852.7165732E-517.4117644
TTAGGAC1301.385888E-817.0769233
AACACTA904.435343E-516.4444455
TCTTATA4400.016.39772837
GGGTAAC803.376286E-416.187525
Produced by FastQC (version 0.11.5)