FastQCFastQC Report
Fri 10 Feb 2017
ERR1632247.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632247.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3595715
Sequences flagged as poor quality0
Sequence length43
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA12750.023.0705871
CTTATAC27250.017.85504537
TATACAC8750.015.857141537
GTATCAA20850.015.2613911
GTACTAG1508.116149E-814.81
TCTTATA44400.014.45833337
TACGTCG1203.3042015E-513.87499921
CCGTTAA950.001245975713.63157916
TATACTG3750.013.325
ATAATAC3200.013.2968763
TAGAGTG4800.013.1041665
TCTATAC2850.012.9824563
TAACGCC3050.012.7377054
CCAATAC4800.012.7187493
ATCAACG31700.012.5473182
GTATTAG6500.012.5230771
CGTTATT2704.3655746E-1112.3333342
CTAACGC1050.002645455312.3333343
ATAACGC3900.012.3333343
GTTATAT3001.8189894E-1212.3333331
Produced by FastQC (version 0.11.5)