FastQCFastQC Report
Fri 10 Feb 2017
ERR1632231.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632231.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3592734
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA19750.024.9164561
CTAACGC609.242026E-418.53
CGAATTA2400.018.515
TCTTATA39150.017.01149637
CTTATAC21650.016.91916837
GTATCAA30200.016.2334442
CGTAACG700.002593932215.85714226
TATACTG3250.014.85
TCTAGCG2301.8189894E-1214.47826128
TATGCCG2600.014.23076933
TAGGACA13900.013.8417274
CTTAGGA13600.013.7389712
GCTTAGG12600.013.6547611
CGAATAC950.001245975413.6315793
TAATACT3550.013.5492954
TTAGGAC15750.013.1555563
CCGAATT3750.012.82666614
CTAGCGG2602.3646862E-1112.80769329
TATACAC8600.012.6918637
CTCTTAT60350.012.660315537
Produced by FastQC (version 0.11.5)