FastQCFastQC Report
Fri 10 Feb 2017
ERR1632213.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632213.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences814852
Sequences flagged as poor quality0
Sequence length43
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTAGGC400.001930707423.1253
CATTACG400.001930707423.1254
GGTATCA3700.023.01
GTTCTAA450.00382486720.5555551
ATTACGA450.00382486720.5555555
ATTCGCC500.007033167418.511
CGATTCG500.007033167418.59
TGCGCGG801.6157295E-518.510
TACGATT500.007033167418.57
TAATAGT852.721541E-517.4117644
CATATCG650.001579400917.0769239
TTTATAC650.001579400917.0769233
TCTTATA13700.016.6094937
TATTATA803.381054E-416.187533
TTACTCG855.361772E-415.2352949
TGGTCGA855.361772E-415.23529410
CTTATAC7350.014.8503437
TTAGGCA750.00410304214.84
GGCTATA750.00410304214.81
AGACGTC908.270372E-414.38888814
Produced by FastQC (version 0.11.5)