ERR1632210.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632210.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22185
Sequences flagged as poor quality	0
Sequence length	43
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT	521	2.3484336263240926	Illumina PCR Primer Index 11 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGT	388	1.7489294568402074	No Hit
CATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTC	279	1.2576064908722109	No Hit
ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCC	277	1.24859139057922	No Hit
ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATG	211	0.951093080910525	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	164	0.7392382240252422	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	126	0.5679513184584178	No Hit
CTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTTC	108	0.486815415821501	Illumina PCR Primer Index 11 (95% over 23bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	91	0.41018706333107957	No Hit
CACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCG	84	0.3786342123056119	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	56	0.2524228082037413	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	36	0.16227180527383367	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC	31	0.1397340545413568	No Hit
GTTCCGACCTGCACGAATGGCGTAACGATGGCCACACTGTCTC	27	0.12170385395537525	No Hit
TTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTA	23	0.10367365336939373	No Hit
TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT	23	0.10367365336939373	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTTC	30	7.949797E-6	37.0	37
TTATACA	50	8.577363E-6	25.900002	2
TATACAC	55	1.7958771E-5	23.545454	3
CCGTCTT	70	4.739968E-6	21.142857	37
GCCGTCT	70	4.739968E-6	21.142857	36
CAGTCGG	45	0.0037103663	20.555555	10
GATTCCT	45	0.0037103663	20.555555	18
ATTCCTC	45	0.0037103663	20.555555	19
TCTTATA	45	0.0037103663	20.555555	36
GGGCAGT	50	0.0068246108	18.5	7
TGATTCC	50	0.0068246108	18.5	17
GCAGTCG	50	0.0068246108	18.5	9
CTTATTG	50	0.0068246108	18.5	28
AGTCGGT	50	0.0068246108	18.5	11
GTGATTC	50	0.0068246108	18.5	16
GGCAGTC	50	0.0068246108	18.5	8
GGTATCA	240	0.0	18.5	1
CTTATAC	75	1.954416E-4	17.266666	1
TACACAT	90	4.1381492E-5	16.444445	2
ATACACA	90	7.831746E-4	14.388888	1