##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1632201.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1739844 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70364067123259 34.0 31.0 34.0 31.0 34.0 2 32.8818928593598 34.0 31.0 34.0 31.0 34.0 3 32.97036228535432 34.0 31.0 34.0 31.0 34.0 4 36.39177707886454 37.0 37.0 37.0 35.0 37.0 5 36.24830731950681 37.0 37.0 37.0 35.0 37.0 6 36.2700983536455 37.0 37.0 37.0 35.0 37.0 7 36.249830444568595 37.0 37.0 37.0 35.0 37.0 8 36.230474686236235 37.0 36.0 37.0 35.0 37.0 9 38.0146835003598 39.0 38.0 39.0 35.0 39.0 10 37.976025436763294 39.0 38.0 39.0 35.0 39.0 11 38.048392269651764 39.0 38.0 39.0 35.0 39.0 12 38.0167779410108 39.0 38.0 39.0 35.0 39.0 13 38.03229599895163 39.0 38.0 39.0 35.0 39.0 14 39.42187288055711 40.0 39.0 41.0 37.0 41.0 15 39.42268559709951 40.0 39.0 41.0 37.0 41.0 16 39.43327505224606 40.0 39.0 41.0 37.0 41.0 17 39.420393437572564 40.0 39.0 41.0 37.0 41.0 18 39.420628516119834 40.0 39.0 41.0 37.0 41.0 19 39.4373380601939 40.0 39.0 41.0 37.0 41.0 20 39.416882777996186 40.0 39.0 41.0 37.0 41.0 21 39.39292085957132 40.0 39.0 41.0 37.0 41.0 22 39.3639113621681 40.0 39.0 41.0 37.0 41.0 23 39.32174838663696 40.0 39.0 41.0 36.0 41.0 24 39.28309664544637 40.0 39.0 41.0 36.0 41.0 25 39.2336841693853 40.0 39.0 41.0 36.0 41.0 26 39.16209671671713 40.0 39.0 41.0 36.0 41.0 27 39.089772991141736 40.0 39.0 41.0 36.0 41.0 28 39.0353870806808 40.0 39.0 41.0 36.0 41.0 29 38.98694940465927 40.0 39.0 41.0 36.0 41.0 30 38.92190046923747 40.0 38.0 41.0 35.0 41.0 31 38.86384124093884 40.0 38.0 41.0 35.0 41.0 32 38.78720218594311 40.0 38.0 41.0 35.0 41.0 33 38.72191932150239 40.0 38.0 41.0 35.0 41.0 34 38.659449352930494 40.0 38.0 41.0 35.0 41.0 35 38.649102448265474 40.0 38.0 41.0 35.0 41.0 36 38.61503445136461 40.0 38.0 41.0 35.0 41.0 37 38.57163343380211 40.0 38.0 41.0 35.0 41.0 38 38.53302479992459 40.0 38.0 41.0 35.0 41.0 39 38.490777334059835 40.0 38.0 41.0 35.0 41.0 40 38.43912787583255 40.0 38.0 41.0 34.0 41.0 41 38.40214065169061 40.0 38.0 41.0 34.0 41.0 42 38.3585235227986 40.0 38.0 41.0 34.0 41.0 43 37.50419003083035 39.0 36.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 6.0 16 2.0 17 8.0 18 21.0 19 41.0 20 74.0 21 128.0 22 288.0 23 487.0 24 820.0 25 1285.0 26 1996.0 27 3062.0 28 4709.0 29 6658.0 30 10018.0 31 13903.0 32 19884.0 33 27817.0 34 41455.0 35 63930.0 36 104248.0 37 194405.0 38 479745.0 39 764853.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.39929326997133 16.908355001942706 11.644492264823743 28.047859463262228 2 19.610953625727365 19.559397279296302 33.02934056156759 27.800308533408742 3 20.284634714376693 20.4194169132405 28.8156294472378 30.48031892514501 4 15.603123038617255 14.641657527916296 32.411009262899434 37.34421017056702 5 16.85628136775481 34.040235791254844 32.64143222035998 16.462050620630357 6 37.37404043121108 32.59280717121765 14.797131237053437 15.23602116051784 7 32.28818215886022 28.331275677589485 19.536004377403952 19.844537786146343 8 29.098126038886246 31.533574274475185 19.04073008844471 20.32756959819386 9 28.357255018266002 13.348495612250295 17.905973179204572 40.38827619027913 10 17.76331671115341 25.447453909660865 31.43000177027366 25.359227608912065 11 38.923087357257316 19.746540494435134 19.875057763799514 21.455314384508036 12 24.14544062571127 23.27720186407517 27.37894891725925 25.198408592954312 13 32.68258533523695 17.78383579217447 22.492591289793797 27.040987582794777 14 24.69537498764257 18.22939298006028 22.966139492966036 34.109092539331115 15 27.051275861514018 25.58373049537775 20.332110235170507 27.032883407937724 16 27.403893682422105 23.82317035320408 21.71033724862689 27.062598715746926 17 26.151022735371676 24.403912074875677 23.100634309742713 26.344430880009934 18 26.54174742103315 22.92734291120353 23.924041465786587 26.60686820197673 19 27.117431217971266 23.260763608691352 23.47561045702948 26.146194716307896 20 27.172148767360753 23.104312800457972 23.555675106503802 26.167863325677477 21 27.6834015003644 23.02384581606167 23.174319076882753 26.118433606691177 22 27.967047620361367 22.99459031959187 22.47546331740087 26.562898742645892 23 26.786999294189595 23.021086948025225 22.94556293552755 27.246350822257625 24 26.734753230749426 23.19713721460085 22.95958718137948 27.10852237327025 25 27.09294626414782 22.681861132377385 23.20558624796246 27.019606355512334 26 26.99132795813878 22.687608774119976 23.12569402774042 27.195369240000826 27 26.967762626994148 22.92015835902529 23.40232802481142 26.709750989169144 28 26.456394941155644 23.023903292479094 23.371693094323398 27.14800867204186 29 26.17907122707553 23.23627865486791 23.44721710682107 27.13743301123549 30 25.795301187922597 23.516763571906445 23.936111513446033 26.751823726724925 31 26.678541294506864 23.201562898742644 22.958552605865815 27.161343200884673 32 26.069406222626856 23.088564262083267 23.744082802826 27.097946712463877 33 25.997848082931576 22.805148047756006 23.925650805474515 27.271353063837907 34 26.677909053915176 22.11014320824166 24.057674136301877 27.15427360154129 35 25.925945084731733 22.330392839817822 24.820558624796245 26.923103450654196 36 25.789208687675448 22.061863017603876 24.864240702039954 27.284687592680722 37 25.834500104607077 21.499513749508576 25.327558102910373 27.338428042973966 38 25.095985617101302 21.223282087359557 26.414724538521845 27.266007757017295 39 25.08684686673058 20.901586579026628 26.930345479249862 27.08122107499293 40 24.60806830957258 21.099133025719546 27.319345872388556 26.973452792319314 41 24.084745528909487 20.52701276666184 28.33305744652969 27.055184257898983 42 23.402155595559144 20.77289688040997 28.597334013854116 27.227613510176774 43 22.487935699982298 20.509999747103763 28.929777612245694 28.072286940668246 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 33.5 2 34.0 3 75.5 4 117.0 5 117.0 6 165.0 7 213.0 8 209.0 9 205.0 10 299.5 11 394.0 12 394.0 13 648.5 14 903.0 15 1433.0 16 1963.0 17 2081.5 18 2200.0 19 2200.0 20 2868.0 21 3536.0 22 4034.0 23 4532.0 24 5827.5 25 7123.0 26 7123.0 27 8823.5 28 10524.0 29 13556.0 30 16588.0 31 20506.5 32 24425.0 33 24425.0 34 30192.0 35 35959.0 36 42316.0 37 48673.0 38 54637.0 39 60601.0 40 60601.0 41 68226.0 42 75851.0 43 84290.0 44 92729.0 45 102881.0 46 113033.0 47 113033.0 48 119851.0 49 126669.0 50 133693.0 51 140717.0 52 146834.5 53 152952.0 54 152952.0 55 152147.0 56 151342.0 57 147549.5 58 143757.0 59 140746.0 60 137735.0 61 137735.0 62 129200.5 63 120666.0 64 105218.5 65 89771.0 66 78962.0 67 68153.0 68 68153.0 69 55546.5 70 42940.0 71 36016.0 72 29092.0 73 22213.0 74 15334.0 75 15334.0 76 12034.0 77 8734.0 78 7008.5 79 5283.0 80 4448.0 81 3613.0 82 3613.0 83 2639.5 84 1666.0 85 1336.5 86 1007.0 87 749.5 88 492.0 89 492.0 90 357.5 91 223.0 92 130.0 93 37.0 94 27.0 95 17.0 96 17.0 97 11.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1739844.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.08571239805442 #Duplication Level Percentage of deduplicated Percentage of total 1 83.40748299019454 44.27745653863083 2 8.385891554129218 8.903420544875546 3 2.77242743811057 4.415288568720375 4 1.362134669560164 2.89239557262759 5 0.809312449148673 2.148146395783575 6 0.5471579250052798 1.7427760945887907 7 0.4015142161250442 1.492026774066105 8 0.31000537350453633 1.3165484879770604 9 0.23370954925348475 1.116597412471448 >10 1.5081491483320533 15.401772800510113 >50 0.15854146869842428 5.8067142242573615 >100 0.10085674594561547 9.469238426051426 >500 0.0028164719922924293 1.0176181594398304 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.2990566970372057E-4 0.0 10 0.0 5.747641742593014E-5 0.0 2.873820871296507E-4 5.747641742593014E-5 11 0.0 5.747641742593014E-5 0.0 4.02334921981511E-4 5.747641742593014E-5 12 0.0 5.747641742593014E-5 0.0 4.5981133940744114E-4 5.747641742593014E-5 13 0.0 5.747641742593014E-5 0.0 5.747641742593014E-4 5.747641742593014E-5 14 0.0 5.747641742593014E-5 0.0 6.897170091111617E-4 5.747641742593014E-5 15 0.0 5.747641742593014E-5 0.0 8.04669843963022E-4 1.1495283485186028E-4 16 0.0 5.747641742593014E-5 0.0 0.0013219576007963932 1.1495283485186028E-4 17 0.0 5.747641742593014E-5 0.0 0.0017817689402038345 1.1495283485186028E-4 18 0.0 5.747641742593014E-5 0.0 0.0018967217750556946 1.1495283485186028E-4 19 0.0 5.747641742593014E-5 0.0 0.0021841038621853454 1.1495283485186028E-4 20 0.0 5.747641742593014E-5 0.0 0.0023565331144631356 1.1495283485186028E-4 21 0.0 5.747641742593014E-5 0.0 0.0027013916190187165 1.1495283485186028E-4 22 0.0 5.747641742593014E-5 0.0 0.0035060614629817384 1.1495283485186028E-4 23 0.0 5.747641742593014E-5 0.0 0.00431073130694476 1.1495283485186028E-4 24 0.0 5.747641742593014E-5 0.0 0.006035023829722665 1.1495283485186028E-4 25 0.0 5.747641742593014E-5 0.0 0.007529410682796849 1.1495283485186028E-4 26 0.0 5.747641742593014E-5 0.0 0.010690613641223007 1.1495283485186028E-4 27 0.0 5.747641742593014E-5 0.0 0.03230174659337274 1.1495283485186028E-4 28 0.0 5.747641742593014E-5 0.0 0.11248134890254528 1.1495283485186028E-4 29 0.0 5.747641742593014E-5 0.0 0.2364579812902766 1.1495283485186028E-4 30 0.0 5.747641742593014E-5 0.0 0.3943456999593067 1.1495283485186028E-4 31 0.0 5.747641742593014E-5 0.0 0.8692158607323415 1.1495283485186028E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 705 0.0 24.666666 1 TCCGTAT 50 2.7028765E-4 22.199999 13 CTTATAC 1660 0.0 18.388552 37 CTAGAAC 430 0.0 18.069767 3 GTTCTAG 340 0.0 17.955881 1 TCTAGAC 340 0.0 17.955881 3 CTAGACA 365 0.0 17.739725 4 CCTAGTA 105 4.800768E-7 17.61905 2 TAGAACT 505 0.0 17.58416 4 GTATCAA 1190 0.0 17.567228 1 CGTTATT 135 2.2213499E-8 16.444443 2 GGACCGT 80 3.3838145E-4 16.1875 6 ACTGATC 355 0.0 16.15493 8 TCTTATA 2945 0.0 16.144312 37 TTTCGGA 150 4.6748028E-9 16.033333 30 CAACGGA 290 0.0 15.948276 24 ATCCGTA 70 0.002593211 15.857143 12 AACGGAG 305 0.0 15.770493 25 GTCTAGA 400 0.0 15.724999 1 ACGGAGT 320 0.0 15.609376 26 >>END_MODULE