FastQCFastQC Report
Fri 10 Feb 2017
ERR1632198.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632198.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116220
Sequences flagged as poor quality0
Sequence length43
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA352.370015E-531.7142851
ATAACGC250.005476285229.63
TATACAC400.001920815223.12500237
TTATACA1053.8198777E-1122.9047637
GTATCAA450.003805457620.5555552
TCAACGC1103.763671E-818.53
TCTTATA2900.017.8620737
TATCAAC1156.2593244E-817.6956521
CAACGCA1201.0176154E-716.9583344
ATCAACG1201.0176154E-716.9583342
AACGCAG1302.53076E-715.6538455
CAGAGTA1551.17830496E-714.322589
CTTATAC1601.7366438E-713.87500136
GAGTACA1501.2766886E-613.56666711
ACGCAGA1551.8460305E-613.1290326
AGAGTAC1551.8460305E-613.12903210
AGTACAT1551.8460305E-613.12903212
CTCTTAT4550.012.60439537
TACATGG1653.7205555E-612.33333314
CGCAGAG1653.7205555E-612.3333337
Produced by FastQC (version 0.11.5)