FastQCFastQC Report
Fri 10 Feb 2017
ERR1632190.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632190.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences194706
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGCTC303.5886036E-430.8333323
GGTATCA751.4551915E-1129.61
GCCGTTC250.005485276729.5999988
GCGCAAG358.8428525E-426.428571
CCTCAAT400.001925462723.12516
AGACGGA450.003814574820.5555576
AGAGCGA450.003814574820.55555715
GTTCTAC555.1220355E-420.1818181
GTATCAA1101.7280399E-920.1818182
GTCTTGC609.199308E-418.51
CAAGACG500.007014427318.4999984
TTGCTGT650.001573570717.07692319
GCTTAGG650.001573570717.0769231
TGGTGTT650.001573570717.0769234
GGACAGT650.001573570717.0769236
TCTTGCT700.002582138915.8571422
GCATCAC750.00408814714.834
CAACGCA1551.192384E-714.3225816
TCAACGC1551.192384E-714.3225815
AACGCAG1601.7573075E-713.8757
Produced by FastQC (version 0.11.5)