ERR1632182.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632182.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	68694
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTCTT	270	0.39304742772294526	RNA PCR Primer, Index 26 (100% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGT	131	0.19070078900631787	No Hit
CATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTC	121	0.17614347686843101	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	97	0.14120592773750254	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	84	0.12228142195824963	No Hit
ACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCC	74	0.10772410982036278	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	72	0.1048126473927854	No Hit
CTCCGAGCCCACGAGACTCCTGAGCATCTCGTATGCCGTCTTC	71	0.10335691617899671	RNA PCR Primer, Index 26 (100% over 23bp)
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	69	0.10044545375141935	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTCT	40	1.5712503E-6	32.375	36
TGCGCGC	25	0.005460863	29.599998	19
TTGCGCG	25	0.005460863	29.599998	18
ATTTGCG	25	0.005460863	29.599998	16
ATGCCGT	45	3.9365696E-6	28.777777	34
TATGCCG	50	8.929628E-6	25.899998	33
CCGTCTT	50	8.929628E-6	25.899998	37
TGCCGTC	50	8.929628E-6	25.899998	35
GGTATCA	80	2.6324415E-8	23.125	1
GGAGTGC	50	2.666415E-4	22.199999	23
CTTATAC	45	0.0037898282	20.555555	37
TTTGCGC	45	0.0037898282	20.555555	17
TGGAGTG	55	5.075718E-4	20.181818	22
ACATCTA	55	5.075718E-4	20.181818	24
CGGACAT	60	9.1167947E-4	18.5	21
GAGTGCA	60	9.1167947E-4	18.5	24
CGTATGC	70	1.1981474E-4	18.5	31
ATCTAAG	60	9.1167947E-4	18.5	26
TCTTATA	80	1.5809064E-5	18.5	37
CATCTAA	60	9.1167947E-4	18.5	25