ERR1632173.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1632173.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	498838
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	4999	1.0021289476743953	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3972	0.7962504861297656	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3522	0.706040838909626	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1268	0.2541907392780823	No Hit
TCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCCGTCTT	651	0.13050328964513527	TruSeq Adapter, Index 6 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1295	0.0	31.857143	1
GGCTATA	25	0.0054933983	29.6	30
ACTCTTA	45	1.3217458E-4	24.666666	14
CCCATAG	85	1.9699655E-9	23.941177	1
AAGGCGT	40	0.0019296635	23.125	23
TAGACAG	50	2.699132E-4	22.2	5
CCCTCGA	45	0.0038228182	20.555555	26
CGTCTTC	45	0.0038228182	20.555555	37
AAGTTTC	45	0.0038228182	20.555555	19
GCTCGAA	45	0.0038228182	20.555555	32
TCGAATA	45	0.0038228182	20.555555	34
CTCGATG	65	6.892123E-5	19.923077	28
GGCCTAA	95	1.6713602E-7	19.473684	10
ATTAGAG	110	3.8386133E-8	18.5	3
CAACGGT	50	0.007029437	18.5	8
CTCGAAT	50	0.007029437	18.5	33
AATAGAC	50	0.007029437	18.5	2
GCCGTCT	140	9.276846E-11	18.5	36
CTAATTA	50	0.007029437	18.5	28
GTAAACA	50	0.007029437	18.5	21