FastQCFastQC Report
Fri 10 Feb 2017
ERR1632090.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632090.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences306803
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTAGA250.005490142429.61
GCGATTT250.005490142429.627
ACCTTAA250.005490142429.68
GGTATCA1100.026.909091
TGACGGG502.6958503E-422.220
TATCACT450.00381951420.5555554
CTAAGTA450.00381951420.55555518
AGTACGC450.00381951420.55555521
GACCACG656.881074E-519.92307711
AGGATTG656.881074E-519.9230775
CTTATAC2850.018.8245637
AAGTACG609.215794E-418.520
CACGGGT609.215794E-418.514
ATGTACA500.007023419318.54
TTATAAC500.007023419318.52
GTACGCA500.007023419318.522
TAGAACT650.001576367817.0769234
CTTAGGA1301.38152245E-817.0769232
AAATGTC650.001576367817.0769237
TTAGGAC1107.761828E-716.8181823
Produced by FastQC (version 0.11.5)