FastQCFastQC Report
Fri 10 Feb 2017
ERR1632088.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632088.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1106859
Sequences flagged as poor quality0
Sequence length43
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATCA4450.022.865171
GTCTATA450.003825720920.5555551
TCTAGAC2100.020.2619063
GTATGTA656.901838E-519.9230751
GTTCTAG2650.019.5471691
GTATTAA1950.018.974361
CTAGACA2900.018.54
ATACCGT609.2365197E-418.56
TGCGTTA609.2365197E-418.537
TACCGTC500.007034720418.57
GTCTAGA2650.018.1509421
GTATCAA7600.017.7697371
ATACCGC2300.017.69565227
CGCAATA1054.796857E-717.6190536
GTGCTAC953.606141E-617.5263161
TCTATAT650.001579884417.0769212
GACGTAT1107.806957E-716.81818226
ACGTATG1107.806957E-716.81818227
TATTAAG1005.877393E-616.6500022
GCGTTAT1901.8189894E-1216.5526311
Produced by FastQC (version 0.11.5)