FastQCFastQC Report
Fri 10 Feb 2017
ERR1632084.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632084.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences577306
Sequences flagged as poor quality0
Sequence length43
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCTAA400.001930028723.1250021
GGTATCA3550.022.4084511
ATAGACG555.1388325E-420.1818183
TATATAA609.229227E-418.55
TAACACA609.229227E-418.54
ACAATAC902.148443E-618.53
GCGATAA701.2178638E-418.522
CCCTTAT500.00703074618.4999981
TTTAGCG752.0650218E-417.26666618
CTAAACA650.001578646217.0769234
GTACTAT650.001578646217.0769236
TAGGACA1757.2759576E-1216.9142864
CTTATAC3300.016.25757637
TCTTATA6150.016.24390237
CGATAAA803.3789172E-416.187523
TTATTGT1151.2395012E-616.0869564
TATATTG700.002590398515.8571425
ATAGTAC700.002590398515.8571423
ATTGCCG700.002590398515.85714211
CGCAAAT700.002590398515.85714223
Produced by FastQC (version 0.11.5)