FastQCFastQC Report
Fri 10 Feb 2017
ERR1632068.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632068.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40733
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCATG250.00543504529.626
GGTATCA250.00543504529.61
TCTTATA555.0269323E-420.18181837
TCTGGAC500.006921768718.53
CTCTTAT850.0092025113.05882436
TGTCTCT2001.8589162E-712.02500137
CTGTCTC2704.947651E-1011.64814937
CCTGTCT1801.1797928E-410.27777836
Produced by FastQC (version 0.11.5)