FastQCFastQC Report
Fri 10 Feb 2017
ERR1632067.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1632067.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107275
Sequences flagged as poor quality0
Sequence length43
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACTCC200.001834505637.06
GGTCGCC358.8168494E-426.4285711
AGGTCGC358.8168494E-426.4285710
GAGGTCG451.3123163E-424.6666669
GGTATCA652.6453872E-622.7692281
TACACTG450.003803571520.5555555
AGAGCAA450.003803571520.55555510
CTTATAC609.1625936E-418.537
GGCCGCA500.006994386718.49999833
GGCTAGC500.006994386718.49999826
GAGCAAG650.001567343117.07692111
AGCAAGC750.00407223214.812
GCTACAC750.00407223214.83
GTATCAA1001.0787592E-414.7999991
TCTCTTA2800.014.53571437
TCTTATA1051.633657E-414.09523837
CTCTTAT1652.521101E-713.45454537
TATCAAC1400.001838288510.5714282
CAACGCA1400.001838288510.5714285
TCAACGC1400.001838288510.5714284
Produced by FastQC (version 0.11.5)