##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1632055.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 415954 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.190922553936254 33.0 31.0 34.0 30.0 34.0 2 32.36649244868423 34.0 31.0 34.0 31.0 34.0 3 32.429047442746075 34.0 31.0 34.0 30.0 34.0 4 36.01782649042923 37.0 35.0 37.0 35.0 37.0 5 35.765262504988534 37.0 35.0 37.0 35.0 37.0 6 35.806726224534444 37.0 35.0 37.0 35.0 37.0 7 35.786584574255805 37.0 35.0 37.0 35.0 37.0 8 35.77704746197897 37.0 35.0 37.0 35.0 37.0 9 37.46719348774143 39.0 37.0 39.0 35.0 39.0 10 37.328238218649176 39.0 37.0 39.0 34.0 39.0 11 37.441370920822976 39.0 37.0 39.0 35.0 39.0 12 37.378277405674666 39.0 37.0 39.0 35.0 39.0 13 37.45728854632964 39.0 37.0 39.0 35.0 39.0 14 38.62304726003356 40.0 38.0 41.0 35.0 41.0 15 38.624641186285025 40.0 38.0 41.0 35.0 41.0 16 38.59850848891945 40.0 38.0 41.0 35.0 41.0 17 38.61643835616438 40.0 38.0 41.0 35.0 41.0 18 38.658789193035766 40.0 38.0 41.0 35.0 41.0 19 38.71274948672209 40.0 38.0 41.0 35.0 41.0 20 38.684570890050345 40.0 38.0 41.0 35.0 41.0 21 38.66058506469465 40.0 38.0 41.0 35.0 41.0 22 38.59639287036547 40.0 38.0 41.0 35.0 41.0 23 38.559263764743214 40.0 38.0 41.0 35.0 41.0 24 38.50013222615962 40.0 38.0 41.0 34.0 41.0 25 38.43270169297566 40.0 38.0 41.0 34.0 41.0 26 38.291577914865584 40.0 38.0 41.0 34.0 41.0 27 38.19123028027138 40.0 38.0 41.0 34.0 41.0 28 38.11543584146324 40.0 38.0 41.0 34.0 41.0 29 38.025469162455465 40.0 37.0 41.0 34.0 41.0 30 37.8822345740154 40.0 37.0 41.0 33.0 41.0 31 37.722870798213265 39.0 37.0 41.0 33.0 41.0 32 37.57059915279093 39.0 36.0 41.0 33.0 41.0 33 37.47264120551792 39.0 36.0 41.0 33.0 41.0 34 37.35523880044428 39.0 36.0 40.0 33.0 41.0 35 37.29349158801214 39.0 36.0 40.0 33.0 41.0 36 37.18937670992465 39.0 36.0 40.0 32.0 41.0 37 37.06453357823221 39.0 36.0 40.0 32.0 41.0 38 36.98247642768191 39.0 35.0 40.0 32.0 41.0 39 36.872497920443124 39.0 35.0 40.0 31.0 41.0 40 36.735687119248766 39.0 35.0 40.0 31.0 41.0 41 36.60071305961717 39.0 35.0 40.0 31.0 41.0 42 36.46487832789202 39.0 35.0 40.0 30.0 41.0 43 35.61838328276684 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 4.0 13 0.0 14 1.0 15 1.0 16 4.0 17 5.0 18 10.0 19 26.0 20 53.0 21 109.0 22 180.0 23 269.0 24 509.0 25 815.0 26 1334.0 27 1929.0 28 2842.0 29 3998.0 30 5416.0 31 7062.0 32 9145.0 33 12282.0 34 17246.0 35 24544.0 36 40337.0 37 74771.0 38 123982.0 39 89079.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.86509565961621 21.146328680575255 13.733970583285652 24.254605076522886 2 18.65182207647961 21.12421085023825 34.93968083009179 25.28428624319035 3 18.516470571265092 24.42818196242854 31.867946936440088 25.187400529866284 4 13.422157257773696 18.11113728921948 36.64299417724075 31.82371127576607 5 12.67832500709213 38.106617558672355 35.250292099607165 13.964765334628348 6 29.406617077849955 38.298465695725966 16.7593051154695 15.535612110954578 7 27.28739235588551 31.737403655211878 22.388773758636773 18.586430230265847 8 27.58550224303649 33.29166205878535 19.64712444164499 19.475711256533174 9 26.293292046716704 13.673146549858878 22.295494213302433 37.73806719012198 10 17.973381672011808 27.084966126062014 32.41969063886872 22.521961563057452 11 33.753491972670055 22.993648336114088 22.626300023560297 20.62655966765556 12 20.70132755064262 29.109468835496234 28.10911783514523 22.080085778715915 13 30.44519345889209 19.954850776768584 25.56123994480159 24.038715819537735 14 21.77764848997726 21.84929102737322 28.052140380907503 28.32092010174202 15 25.32179039028354 27.647528332459842 23.830279309731363 23.200401967525256 16 22.96840516018598 26.081489780119917 26.541155993210786 24.408949066483313 17 21.049683378450503 28.312505709765983 27.77710996889079 22.860700942892723 18 21.556951009005804 26.354837313741424 28.360587949629046 23.72762372762373 19 22.92032292032292 26.571207393125203 30.100684210273254 20.40778547627863 20 22.97826201935791 25.700678440404467 29.652076912350882 21.668982627886738 21 23.505724190655698 25.4232439163946 28.934930304793316 22.136101588156382 22 23.401145318953535 26.21828375253033 29.041672877289315 21.338898051226817 23 22.39189910422787 25.611726296657807 29.149857916981205 22.84651668213312 24 21.446842679719392 27.561941945503587 28.229083023603575 22.76213235117345 25 22.109896767431014 26.180058371839195 28.990946114233786 22.71909874649601 26 21.42544608298033 26.8459973939426 29.39435610668487 22.334200416392196 27 21.292258278559647 27.172475802612787 29.081581136375657 22.453684782451905 28 21.107382066286178 26.626982791366355 30.299504272107015 21.96613087024046 29 22.07287344273646 27.147953860282627 29.32319439168754 21.455978305293375 30 22.48830399515331 26.814984349230926 28.88829053212615 21.808421123489616 31 22.02839737086312 26.615202642599904 29.227270323160738 22.129129663376236 32 20.930920245988737 26.84743986113849 29.844646283002447 22.376993609870322 33 20.72584949297278 27.039768820590737 29.858590132562735 22.375791553873743 34 22.057246714780963 25.78818811695524 29.89777715805113 22.256788010212667 35 21.60575448246681 26.105290488852134 30.356722137544057 21.932232891137 36 22.56523557893421 26.192800165402907 28.43727912221063 22.804685133452256 37 21.306682950518567 25.405213076445953 29.57586656216793 23.712237410867548 38 21.483625593214633 24.90587901546806 30.770950633964333 22.839544757352975 39 20.654206955576818 25.28476706558898 30.644975165523107 23.416050813311088 40 20.600595258129506 24.677247964919196 32.48940988667016 22.23274689028114 41 20.014953576597414 24.931122191396163 31.724661861648162 23.32926237035826 42 20.0320227717488 25.398962385263758 31.592916524423377 22.976098318564073 43 19.6661169263909 24.19281939829885 31.802555090226324 24.33850858508393 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 207.0 1 148.0 2 89.0 3 220.0 4 351.0 5 351.0 6 547.5 7 744.0 8 788.0 9 832.0 10 1204.5 11 1577.0 12 1577.0 13 2786.5 14 3996.0 15 6290.5 16 8585.0 17 7487.0 18 6389.0 19 6389.0 20 6458.0 21 6527.0 22 4709.0 23 2891.0 24 2980.0 25 3069.0 26 3069.0 27 3867.5 28 4666.0 29 6259.0 30 7852.0 31 10297.0 32 12742.0 33 12742.0 34 16546.0 35 20350.0 36 22011.0 37 23672.0 38 23797.0 39 23922.0 40 23922.0 41 26638.0 42 29354.0 43 30647.5 44 31941.0 45 32512.5 46 33084.0 47 33084.0 48 33516.5 49 33949.0 50 34162.0 51 34375.0 52 32059.0 53 29743.0 54 29743.0 55 28138.0 56 26533.0 57 23297.0 58 20061.0 59 17703.5 60 15346.0 61 15346.0 62 13674.5 63 12003.0 64 10045.0 65 8087.0 66 6514.5 67 4942.0 68 4942.0 69 4014.5 70 3087.0 71 2567.5 72 2048.0 73 1646.5 74 1245.0 75 1245.0 76 985.0 77 725.0 78 578.0 79 431.0 80 330.5 81 230.0 82 230.0 83 197.0 84 164.0 85 124.5 86 85.0 87 60.5 88 36.0 89 36.0 90 28.0 91 20.0 92 11.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 415954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.30073717484209 #Duplication Level Percentage of deduplicated Percentage of total 1 78.15529642885501 36.1864783877429 2 10.90901354180022 10.101907376713704 3 3.672903331110411 5.101743954070354 4 1.7426625453854698 3.227462419933359 5 1.0919529825121823 2.5279114025290745 6 0.7361459721581081 2.045046070752671 7 0.5108296494284886 1.6556252537513625 8 0.4423952528594288 1.6386581064033776 9 0.32137699161252914 1.3391992460423827 >10 2.161175619854493 18.669516720726413 >50 0.16684686957405648 5.198461032880895 >100 0.08368332087670642 8.002852793269739 >500 0.0031186330761505503 0.9421774428835938 >1k 0.0025988608967921246 3.3629597923002144 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4589 1.1032469936579525 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3641 0.8753371767070398 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3021 0.7262822331315483 No Hit CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGT 1375 0.3305653990585497 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1348 0.3240742966770364 No Hit TCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTCTT 813 0.19545430504334613 RNA PCR Primer, Index 29 (95% over 23bp) GATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGAT 742 0.17838510989195921 No Hit CCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC 686 0.1649220827303019 No Hit CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAA 608 0.14617000918370782 No Hit ACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCC 563 0.1353515052145189 No Hit GTGTTGAGCTTGAACGCTTTCTTAATTGGTGGCTGCTTTTAGG 503 0.12092683325560039 No Hit GCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACA 487 0.11708025406655542 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 467 0.11227203008024925 No Hit GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATA 452 0.10866586209051964 No Hit CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTG 451 0.10842545089120431 No Hit TCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGGGTT 445 0.10698298369531246 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 442 0.10626175009736655 No Hit ATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATG 427 0.1026555821076369 No Hit GATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAG 427 0.1026555821076369 No Hit CATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTC 417 0.1002514701144838 RNA PCR Primer, Index 29 (95% over 21bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.404111993153089E-4 0.0 2 0.0 0.0 0.0 2.404111993153089E-4 0.0 3 0.0 0.0 0.0 2.404111993153089E-4 0.0 4 0.0 0.0 0.0 2.404111993153089E-4 0.0 5 0.0 0.0 0.0 4.808223986306178E-4 0.0 6 0.0 0.0 0.0 4.808223986306178E-4 0.0 7 0.0 0.0 0.0 4.808223986306178E-4 0.0 8 0.0 0.0 0.0 4.808223986306178E-4 0.0 9 0.0 0.0 0.0 7.212335979459268E-4 0.0 10 0.0 0.0 0.0 0.0014424671958918535 0.0 11 0.0 0.0 0.0 0.0014424671958918535 0.0 12 0.0 0.0 0.0 0.0014424671958918535 0.0 13 0.0 0.0 0.0 0.0014424671958918535 0.0 14 0.0 0.0 0.0 0.0014424671958918535 0.0 15 0.0 0.0 0.0 0.0014424671958918535 0.0 16 0.0 0.0 0.0 0.0014424671958918535 0.0 17 0.0 0.0 0.0 0.0019232895945224713 0.0 18 0.0 0.0 0.0 0.0019232895945224713 0.0 19 0.0 0.0 0.0 0.00216370079383778 0.0 20 0.0 0.0 0.0 0.00216370079383778 0.0 21 0.0 0.0 0.0 0.0036061679897296337 0.0 22 0.0 0.0 0.0 0.006250691182198032 0.0 23 0.0 0.0 0.0 0.007933569577405195 0.0 24 0.0 0.0 0.0 0.012501382364396064 0.0 25 0.0 0.0 0.0 0.01779042874933286 0.0 26 0.0 0.0 0.0 0.02211783033700842 0.0 27 0.0 0.0 0.0 0.05024594065689956 0.0 28 0.0 0.0 0.0 0.12453300124533001 0.0 29 0.0 0.0 0.0 0.23392009693379556 0.0 30 0.0 0.0 0.0 0.40340999245108833 0.0 31 0.0 0.0 0.0 0.9169283141885881 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGAAC 20 0.0018405862 37.0 3 GGTATCA 1070 0.0 25.588785 1 GTACTAT 110 0.0 25.227272 1 GCCGTCT 155 0.0 23.870968 36 TACACAT 295 0.0 23.83051 5 CGGTCTA 55 1.8988765E-5 23.545454 16 TACTATA 150 0.0 22.2 2 CCGTCTT 170 0.0 21.764706 37 TTAGGCA 70 5.0890176E-6 21.142857 4 ATACACA 340 0.0 20.676472 4 TAGCGCA 45 0.0038217665 20.555555 19 TATAGAG 45 0.0038217665 20.555555 2 GGTTAGA 45 0.0038217665 20.555555 1 TGCGATG 55 5.1355135E-4 20.181818 28 GGCTAAA 65 6.8886045E-5 19.923077 1 TATACAC 385 0.0 19.7013 3 CTAGAGG 50 0.00702752 18.5 3 CCGATAG 60 9.223313E-4 18.5 15 GCAAACC 50 0.00702752 18.5 37 TATATCG 50 0.00702752 18.5 5 >>END_MODULE